ECM23/YPL021W Summary Help

Standard Name ECM23 1
Systematic Name YPL021W
Alias SRD2
Feature Type ORF, Verified
Description Non-essential protein of unconfirmed function; affects pre-rRNA processing, may act as a negative regulator of the transcription of genes involved in pseudohyphal growth; homologous to Srd1p (1, 2)
Name Description ExtraCellular Mutant
Chromosomal Location
ChrXVI:511101 to 511664 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All ECM23 GO evidence and references
  View Computational GO annotations for ECM23
Molecular Function
Manually curated
High-throughput
Biological Process
Manually curated
Cellular Component
Manually curated
Regulators 2 genes
Resources
Large-scale survey
null
overexpression
unspecified
Resources
17 total interaction(s) for 16 unique genes/features.
Genetic Interactions
  • Negative Genetic: 13
  • Positive Genetic: 2
  • Synthetic Growth Defect: 2

Resources
Expression Summary
histogram
Resources
Length (a.a.) 187
Molecular Weight (Da) 20,613
Isoelectric Point (pI) 10.77
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXVI:511101 to 511664 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..564 511101..511664 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000005942
References cited on this page View Complete Literature Guide for ECM23
1) Lussier M, et al.  (1997) Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae. Genetics 147(2):435-50
2) Canizares JV, et al.  (2002) The SRD2 gene is involved in Saccharomyces cerevisiae morphogenesis. Arch Microbiol 177(4):352-7
3) Badis G, et al.  (2008) A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol Cell 32(6):878-87