CHC1/YGL206C Summary Help

Standard Name CHC1 1
Systematic Name YGL206C
Alias SWA5 2
Feature Type ORF, Verified
Description Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; two heavy chains form the clathrin triskelion structural component; the light chain (CLC1) is thought to regulate function (1, 3, 4)
Name Description Clathrin Heavy Chain 1
Chromosomal Location
ChrVII:107504 to 102543 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Genetic position: -133 cM
Gene Ontology Annotations All CHC1 GO evidence and references
  View Computational GO annotations for CHC1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
conditional
null
Large-scale survey
null
overexpression
Resources
157 total interaction(s) for 92 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 45
  • Affinity Capture-RNA: 2
  • Affinity Capture-Western: 25
  • Co-localization: 7
  • PCA: 11
  • Reconstituted Complex: 7
  • Two-hybrid: 3

Genetic Interactions
  • Dosage Growth Defect: 1
  • Dosage Rescue: 10
  • Negative Genetic: 4
  • Phenotypic Enhancement: 7
  • Phenotypic Suppression: 1
  • Positive Genetic: 1
  • Synthetic Growth Defect: 23
  • Synthetic Lethality: 9
  • Synthetic Rescue: 1

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrVII:107504 to 102543 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Genetic position: -133 cM
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..4962 107504..102543 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003174
References cited on this page View Complete Literature Guide for CHC1
1) Payne GS and Schekman R  (1985) A test of clathrin function in protein secretion and cell growth. Science 230(4729):1009-14
2) Chen CY and Graham TR  (1998) An arf1Delta synthetic lethal screen identifies a new clathrin heavy chain conditional allele that perturbs vacuolar protein transport in Saccharomyces cerevisiae. Genetics 150(2):577-89
3) Lemmon SK and Jones EW  (1987) Clathrin requirement for normal growth of yeast. Science 238(4826):504-9
4) Gruenberg J and Stenmark H  (2004) The biogenesis of multivesicular endosomes. Nat Rev Mol Cell Biol 5(4):317-23