CDC5/YMR001C Summary Help

Standard Name CDC5 1 (see Nomenclature conflict Note)
Systematic Name YMR001C
Alias MSD2 2 , PKX2
Feature Type ORF, Verified
Description Polo-like kinase with multiple functions in mitosis and cytokinesis through substrate phosphorylation, also functions in adaptation to DNA damage during meiosis; has similarity to Xenopus Plx1 and S. pombe Plo1p; possible Cdc28p substrate (3, 4, 5, 6)
Name Description Cell Division Cycle 7
Chromosomal Location
ChrXIII:271136 to 269019 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Genetic position: -14 cM
Gene Ontology Annotations All CDC5 GO evidence and references
  View Computational GO annotations for CDC5
Molecular Function
Manually curated
High-throughput
Biological Process
Manually curated
High-throughput
Cellular Component
Manually curated
Regulatory Role
Regulatory modules predicted: stressResponse (511)
predicted: cellcycle (263, 221)
predicted: stressResponse (511)
predicted: cellcycle (263, 221)
Classical genetics
conditional
null
overexpression
reduction of function
repressible
Large-scale survey
null
overexpression
reduction of function
Resources
341 total interaction(s) for 170 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 59
  • Affinity Capture-Western: 29
  • Biochemical Activity: 45
  • Co-localization: 7
  • Co-purification: 2
  • Protein-peptide: 2
  • Reconstituted Complex: 9
  • Two-hybrid: 22

Genetic Interactions
  • Dosage Growth Defect: 1
  • Dosage Lethality: 13
  • Dosage Rescue: 34
  • Negative Genetic: 13
  • Phenotypic Enhancement: 14
  • Phenotypic Suppression: 21
  • Positive Genetic: 7
  • Synthetic Growth Defect: 10
  • Synthetic Lethality: 19
  • Synthetic Rescue: 34

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIII:271136 to 269019 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Genetic position: -14 cM
Last Update Coordinates: 1996-07-31 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..2118 271136..269019 1996-07-31 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000004603

NOMENCLATURE CONFLICT NOTE

NameRelevanceDescription
CEF1Nomenclature conflictCEF1/YMR213W encodes a splicing factor and is homologous to the pombe cdc5 gene. Do not confuse CEF1/YMR213W with cerevisiae CDC5/YMR001C, which encodes a Polo-like kinase homologous to the pombe plo1 gene.
HDA3Nomenclature conflictCDC5/YMR001C encodes a Polo-like kinase and is homologous to the pombe plo1 gene. Do not confuse CDC5/YMR001C with the cerevisiae HDA3 gene, which has been referred to in the cerevisiae literature as PLO1.
References cited on this page View Complete Literature Guide for CDC5
1) Hartwell LH, et al.  (1973) Genetic Control of the Cell Division Cycle in Yeast: V. Genetic Analysis of cdc Mutants. Genetics 74(2):267-286
2) Kitada K, et al.  (1993) A multicopy suppressor gene of the Saccharomyces cerevisiae G1 cell cycle mutant gene dbf4 encodes a protein kinase and is identified as CDC5. Mol Cell Biol 13(7):4445-57
3) Hu F and Elledge SJ  (2002) Bub2 is a cell cycle regulated phospho-protein controlled by multiple checkpoints. Cell Cycle 1(5):351-5
4) Ubersax JA, et al.  (2003) Targets of the cyclin-dependent kinase Cdk1. Nature 425(6960):859-64
5) Alexandru G, et al.  (2001) Phosphorylation of the cohesin subunit Scc1 by Polo/Cdc5 kinase regulates sister chromatid separation in yeast. Cell 105(4):459-72
6) Iacovella MG, et al.  (2010) Analysis of Polo-like kinase Cdc5 in the meiosis recombination checkpoint. Cell Cycle 9(6):1182-93
7) Hartwell LH, et al.  (1970) Genetic control of the cell-division cycle in yeast. I. Detection of mutants. Proc Natl Acad Sci U S A 66(2):352-9