BUD22/YMR014W Summary Help

Standard Name BUD22 1
Systematic Name YMR014W
Feature Type ORF, Verified
Description Protein required for rRNA maturation and ribosomal subunit biogenesis; required for 18S rRNA maturation; also required for small ribosomal subunit biogenesis; cosediments with pre-ribosomal particles; mutation decreases efficiency of +1 Ty1 frameshifting and transposition, and affects budding pattern (1, 2, 3)
Name Description BUD site selection 1
Chromosomal Location
ChrXIII:298868 to 300427 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All BUD22 GO evidence and references
  View Computational GO annotations for BUD22
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 79 genes
Resources
Classical genetics
null
Large-scale survey
null
overexpression
Resources
14 total interaction(s) for 13 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 10
  • Affinity Capture-RNA: 2

Genetic Interactions
  • Dosage Lethality: 2

Resources
Expression Summary
histogram
Resources
Length (a.a.) 519
Molecular Weight (Da) 60,054
Isoelectric Point (pI) 9.51
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIII:298868 to 300427 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1560 298868..300427 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000004616
References cited on this page View Complete Literature Guide for BUD22
1) Ni L and Snyder M  (2001) A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell 12(7):2147-70
2) Li Z, et al.  (2009) Rational extension of the ribosome biogenesis pathway using network-guided genetics. PLoS Biol 7(10):e1000213
3) Dakshinamurthy A, et al.  (2010) BUD22 Affects Ty1 Retrotransposition and Ribosome Biogenesis in Saccharomyces cerevisiae. Genetics 185(4):1193-205