YSF3/YNL138W-A Summary Help

Standard Name YSF3 1
Systematic Name YNL138W-A
Alias RCP10 2
Feature Type ORF, Verified
Description Component of the SF3b subcomplex of the U2 snRNP; essential protein required for for splicing and for assembly of SF3b (2)
Name Description Yeast Splicing Factor 3b subunit 1
Chromosomal Location
ChrXIV:366033 to 366412 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All YSF3 GO evidence and references
  View Computational GO annotations for YSF3
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Regulators 5 genes
Resources
Classical genetics
null
Large-scale survey
null
Resources
5 total interaction(s) for 5 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 4
  • Affinity Capture-RNA: 1

Resources
Length (a.a.) 85
Molecular Weight (Da) 10,027
Isoelectric Point (pI) 10.69
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIV:366033 to 366412 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 2003-07-29
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..3 366033..366035 2011-02-03 2003-07-29
Intron 4..125 366036..366157 2011-02-03 2003-07-29
CDS 126..380 366158..366412 2011-02-03 2003-07-29
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000028509
References cited on this page View Complete Literature Guide for YSF3
1) Dziembowski A, et al.  (2004) Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing. EMBO J 23(24):4847-56
2) Wang Q, et al.  (2005) Interactions of the yeast SF3b splicing factor. Mol Cell Biol 25(24):10745-54