TRN1/tP(UGG)A Summary Help

Standard Name TRN1 1, 2
Systematic Name tP(UGG)A
Feature Type tRNA
Description Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis; target of K. lactis zymocin; can mutate to suppress +1 frameshift mutations in proline codons (1, 3, 4)
Name Description TRNA
Chromosomal Location
ChrI:139152 to 139254 | ORF Map | GBrowse
Gbrowse
Genetic position: -2 cM
Gene Ontology Annotations All TRN1 GO evidence and references
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Large-scale survey
null
sequence information
ChrI:139152 to 139254 | ORF Map | GBrowse
SGD ORF map
Genetic position: -2 cM
Last Update Coordinates: 2011-02-03 | Sequence: 2000-05-19
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
Noncoding exon 1..36 139152..139187 2011-02-03 2000-05-19
Intron 37..67 139188..139218 2011-02-03 2000-05-19
Noncoding exon 68..103 139219..139254 2011-02-03 2000-05-19
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
Resources
External Links All Associated Seq | Search all NCBI (Entrez)
Primary SGDIDS000006680
References cited on this page View Complete Literature Guide for TRN1
1) Cummins CM, et al.  (1985) Frameshift suppressor mutations outside the anticodon in yeast proline tRNAs containing an intervening sequence. Mol Cell Biol 5(7):1760-71
2) Cummins, C. and Culbertson, M.  (1985) Personal Communication, Mortimer Map Edition 9
3) Huang B, et al.  (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94
4) Chan PP and Lowe TM  (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7