RRP9/YPR137W Summary Help

Standard Name RRP9 1
Systematic Name YPR137W
Feature Type ORF, Verified
Description Protein involved in pre-rRNA processing; associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein (1)
Name Description Ribosomal RNA Processing 1
Chromosomal Location
ChrXVI:802359 to 804080 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All RRP9 GO evidence and references
  View Computational GO annotations for RRP9
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 1 genes
Resources
Large-scale survey
null
reduction of function
Resources
129 total interaction(s) for 60 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 114
  • Affinity Capture-RNA: 4
  • Affinity Capture-Western: 3
  • PCA: 2
  • Two-hybrid: 2

Genetic Interactions
  • Positive Genetic: 2
  • Synthetic Growth Defect: 2

Resources
Expression Summary
histogram
Resources
Length (a.a.) 573
Molecular Weight (Da) 65,053
Isoelectric Point (pI) 5.52
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXVI:802359 to 804080 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1722 802359..804080 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000006341
References cited on this page View Complete Literature Guide for RRP9
1) Venema J, et al.  (2000) Yeast Rrp9p is an evolutionarily conserved U3 snoRNP protein essential for early pre-rRNA processing cleavages and requires box C for its association. RNA 6(11):1660-71