HRT1/YOL133W Summary Help

Standard Name HRT1 1 (see Nomenclature conflict Note)
Systematic Name YOL133W
Alias RBX1 , ROC1 2 , HRT2
Feature Type ORF, Verified
Description RING-H2 domain core subunit of multiple ubiquitin ligase complexes; subunit of Skp1-Cullin-F-box (SCF) that tethers the Cdc34p (E2) and Cdc53p (cullin) SCF subunits, and is required for degradation of Gic2p, Far1p, Sic1p and Cln2p; subunit of the Rtt101p-Mms1p-Mms22p ubiquitin ligase that stabilizes replication forks after DNA lesions; subunit of the Cul3p-Elc1p-Ela1p ubiquitin ligase involved in Rpb1p degradation as part of transcription-coupled repair (1, 2, 3, 4, 5, 6, 7, 8)
Name Description High level expression Reduces Ty3 transposition 1
Chromosomal Location
ChrXV:70325 to 70690 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All HRT1 GO evidence and references
  View Computational GO annotations for HRT1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Regulatory Role
Regulatory modules predicted: stressResponse (421)
Classical genetics
null
Large-scale survey
null
reduction of function
Resources
127 total interaction(s) for 82 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 38
  • Affinity Capture-RNA: 4
  • Affinity Capture-Western: 21
  • Co-crystal Structure: 1
  • Co-purification: 1
  • FRET: 1
  • Reconstituted Complex: 27
  • Two-hybrid: 14

Genetic Interactions
  • Dosage Growth Defect: 1
  • Dosage Lethality: 4
  • Dosage Rescue: 1
  • Negative Genetic: 1
  • Synthetic Growth Defect: 3
  • Synthetic Lethality: 10

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXV:70325 to 70690 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2006-01-05 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..366 70325..70690 2006-01-05 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000005493

NOMENCLATURE CONFLICT NOTE

NameRelevanceDescription
YMR027WNomenclature conflictBoth HRT1/RBX1/ROC1/YOL133W and HRT2/YMR027W have been referred to as HRT2. In Swaroop et al (2000) Oncogene 19:2855-66, YOL133W is referred to as HRT2.
References cited on this page View Complete Literature Guide for HRT1
1) Seol JH, et al.  (1999) Cdc53/cullin and the essential Hrt1 RING-H2 subunit of SCF define a ubiquitin ligase module that activates the E2 enzyme Cdc34. Genes Dev 13(12):1614-26
2) Ohta T, et al.  (1999) ROC1, a homolog of APC11, represents a family of cullin partners with an associated ubiquitin ligase activity. Mol Cell 3(4):535-41
3) Blondel M, et al.  (2000) Isolation and characterization of HRT1 using a genetic screen for mutants unable to degrade Gic2p in saccharomyces cerevisiae. Genetics 155(3):1033-44
4) Kamura T, et al.  (1999) Rbx1, a component of the VHL tumor suppressor complex and SCF ubiquitin ligase. Science 284(5414):657-61
5) Skowyra D, et al.  (1999) Reconstitution of G1 cyclin ubiquitination with complexes containing SCFGrr1 and Rbx1. Science 284(5414):662-5
6) Zachariae W and Nasmyth K  (1999) Whose end is destruction: cell division and the anaphase-promoting complex. Genes Dev 13(16):2039-58
7) Michel JJ, et al.  (2003) A role for Saccharomyces cerevisiae Cul8 ubiquitin ligase in proper anaphase progression. J Biol Chem 278(25):22828-37
8) Finley D, et al.  (2012) The Ubiquitin-Proteasome System of Saccharomyces cerevisiae. Genetics 192(2):319-60