| Standard Name | MDH2 |
|---|---|
| Systematic Name | YOL126C |
| Feature Type | ORF, Verified |
| Description | Cytoplasmic malate dehydrogenase, one of three isozymes that catalyze interconversion of malate and oxaloacetate; involved in the glyoxylate cycle and gluconeogenesis during growth on two-carbon compounds; interacts with Pck1p and Fbp1 (1, 2, 3 and see Summary Paragraph) |
| Name Description | Malate DeHydrogenase |
| Chromosomal Location | |
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| Note: this feature is encoded on the Crick strand. | |
| View Computational GO annotations for MDH2 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated | |
| High-throughput |
| Pathways |
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| Classical genetics | |
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| null |
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| unspecified | |
| Large-scale survey | |
| null |
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| overexpression | |
| Resources |
| 42 total interaction(s) for 37 unique genes/features. | |
| Physical Interactions |
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| Genetic Interactions |
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| Resources |
| Localization | |
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| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
| Note: this feature is encoded on the Crick strand. | |||||||||||||
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| Last Update | Coordinates: 2006-10-06 | Sequence: 2006-10-06 | ||||||||||||
| Subfeature details |
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| S288C only | |
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| S288C vs. other species | |
| S288C vs. other strains |
| External Links | All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000005486 |
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Gluconeogenesis is the process whereby glucose is synthesized from non-carbohydrate precursors, which enables yeast cells to grow on non-sugar carbon sources like ethanol, glycerol, or peptone. The reactions of gluconeogenesis, shown here, mediate conversion of pyruvate to glucose, which is the opposite of glycolysis, the formation of pyruvate from glucose. While these two pathways have several reactions in common, they are not the exact reverse of each other. As the glycolytic enzymes phosphofructokinase (Pfk1p, Pfk2p) and pyruvate kinase (Cdc19p) only function in the forward direction, the gluconeogenesis pathway replaces those steps with the enzymes pyruvate carboxylase (Pyc1p, Pyc2p) and phosphoenolpyruvate carboxykinase (Pck1p)-generating oxaloacetate as an intermediate from pyruvate to phosphoenolpyruvate-and also the enzyme fructose-1,6-bisphosphatase (Fbp1p) (reviewed in 4). Overall, the gluconeogenic reactions convert two molecules of pyruvate to a molecule of glucose, with the expenditure of six high-energy phosphate bonds, four from ATP and two from GTP. Expression of genes encoding several of the gluconeogenic enzymes is subject to glucose repression (5).
MDH2 encodes cytosolic malate dehydrogenase, which generates oxaloacetate for glucose synthesis during gluconeogenesis. As such, Mdh2p is required for growth on minimal medium with ethanol or acetate as the carbon source (1). There are two other malate dehydrogenase isozymes: Mdh1p localizes to mitochondria and functions in the TCA cycle, and Mdh3p is in the peroxisome and is thought to catalyze a step in the glyoxylate pathway (reviewed in 3).
Levels of Mdh2p are regulated by glucose represssion of transcription and also by protein degradation when glucose-starved cells are replenished with glucose (6). Mdh2p is phosphorylated during the process of degradation, and both phosphorylation and degradation require a 12-residue amino-terminal extension not found in Mdh1p and Mdh3p (7, 8). There appear to be two pathways for degradation of Mdh2p: a proteasomal pathway that acts following short-term glucose starvation and a vacuolar pathway that functions following long-term glucose starvation (6). Mdh2p interacts with Pck1p and Fbp1p, which may facilitate flux through the gluconeogenic pathway, given the unfavorable equilibrium for formation of oxaloacetate from malate (3).
| 1) | Minard KI and McAlister-Henn L (1991) Isolation, nucleotide sequence analysis, and disruption of the MDH2 gene from Saccharomyces cerevisiae: evidence for three isozymes of yeast malate dehydrogenase. Mol Cell Biol 11(1):370-80 |
| 2) | Lorenz MC and Fink GR (2001) The glyoxylate cycle is required for fungal virulence. Nature 412(6842):83-6 |
| 3) | Gibson N and McAlister-Henn L (2003) Physical and genetic interactions of cytosolic malate dehydrogenase with other gluconeogenic enzymes. J Biol Chem 278(28):25628-36 |
| 4) | Klein CJ, et al. (1998) Glucose control in Saccharomyces cerevisiae: the role of Mig1 in metabolic functions. Microbiology 144 ( Pt 1):13-24 |
| 5) | Haarasilta S and Oura E (1975) On the activity and regulation of anaplerotic and gluconeogenetic enzymes during the growth process of baker's yeast. The biphasic growth. Eur J Biochem 52(1):1-7 |
| 6) | Hung GC, et al. (2004) Degradation of the gluconeogenic enzymes fructose-1,6-bisphosphatase and malate dehydrogenase is mediated by distinct proteolytic pathways and signaling events. J Biol Chem 279(47):49138-50 |
| 7) | Minard KI and McAlister-Henn L (1994) Glucose-induced phosphorylation of the MDH2 isozyme of malate dehydrogenase in Saccharomyces cerevisiae. Arch Biochem Biophys 315(2):302-9 |
| 8) | Minard KI and McAlister-Henn L (1992) Glucose-induced degradation of the MDH2 isozyme of malate dehydrogenase in yeast. J Biol Chem 267(24):17458-64 |





