DBP6/YNR038W Summary Help

Standard Name DBP6 1
Systematic Name YNR038W
Feature Type ORF, Verified
Description Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family (1)
Name Description Dead Box Protein 1
Chromosomal Location
ChrXIV:695595 to 697484 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All DBP6 GO evidence and references
  View Computational GO annotations for DBP6
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Regulators 8 genes
Resources
Classical genetics
dominant negative
null
reduction of function
repressible
Large-scale survey
conditional
null
reduction of function
repressible
unspecified
Resources
27 total interaction(s) for 23 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 7
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 3
  • Biochemical Activity: 1
  • PCA: 1

Genetic Interactions
  • Dosage Rescue: 1
  • Negative Genetic: 3
  • Phenotypic Enhancement: 1
  • Synthetic Growth Defect: 3
  • Synthetic Lethality: 6

Resources
Expression Summary
histogram
Resources
Length (a.a.) 629
Molecular Weight (Da) 70,361
Isoelectric Point (pI) 6.19
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIV:695595 to 697484 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1997-01-28
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1890 695595..697484 2011-02-03 1997-01-28
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000005321
References cited on this page View Complete Literature Guide for DBP6
1) Kressler D, et al.  (1998) Dbp6p is an essential putative ATP-dependent RNA helicase required for 60S-ribosomal-subunit assembly in Saccharomyces cerevisiae. Mol Cell Biol 18(4):1855-65