YIP3/YNL044W Summary Help

YIP3 BASIC INFORMATION

Standard Name YIP3
Systematic Name YNL044W
Feature Type ORF, Verified
Description Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p (1, 2, 3)
GO Annotations All YIP3 GO evidence and references
    View Computational GO annotations for YIP3
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Mutant Phenotype All YIP3 Phenotype details and references
Classical genetics
null
overexpression
Large-scale survey
null
Interactions YIP3 All interactions details and references
90 total interaction(s) for 59 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 4
  • Affinity Capture-Western: 10
  • Co-fractionation: 1
  • Co-purification: 2
  • Two-hybrid: 37
Genetic Interactions
  • Phenotypic Enhancement: 34
  • Synthetic Growth Defect: 1
  • Synthetic Lethality: 1
Sequence Information
ChrXIV:545270 to 545879 | ORF Map | GBrowse
Gbrowse
Last Update Coordinates: 2010-01-05 | Sequence: 1999-11-17
Subfeature details
Relative
Coordinates		 Chromosomal
Coordinates		 Most Recent Updates
Coordinates Sequence
CDS 1..24 545270..545293 2010-01-05 1999-11-17
Intron 25..103 545294..545372 2010-01-05 1999-11-17
CDS 104..610 545373..545879 2010-01-05 1999-11-17
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | UniProtKB
Primary SGDIDS000004989

YIP3 RESOURCES

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SGD ORF mapGBrowse
SGD ORF map
 GBrowse
  • Literature
  • Retrieve Sequences
  • Sequence Analysis Tools
  • Protein Info & Structure
  • Localization Resources
  • Interactions
  • Phenotype Resources
  • Maps & Displays
  • Comparison Resources
  • Functional Analysis

Click on histogram for expression summary
Expression Summary histogram

ADDITIONAL INFORMATION for YIP3

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for YIP3]

1) Otte S, et al.  (2001) Erv41p and Erv46p: new components of COPII vesicles involved in transport between the ER and Golgi complex. J Cell Biol 152(3):503-18
2) Calero M and Collins RN  (2002) Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins. Biochem Biophys Res Commun 290(2):676-81
3) Geng J, et al.  (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74