YMR279C Summary Help

Systematic Name YMR279C
Feature Type ORF, Verified
Description Putative boron transporter involved in boron efflux and resistance; overexpression mutant but not null mutant displays boron tolerance phenotype; identified as a heat-induced gene in a high-throughout screen; YMR279C is not an essential gene; YMR279C has a paralog, ATR1, that arose from the whole genome duplication (1, 2, 3, 4)
Chromosomal Location
ChrXIII:826351 to 824729 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All YMR279C GO evidence and references
  View Computational GO annotations for YMR279C
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
High-throughput
Regulators 8 genes
Resources
Classical genetics
null
overexpression
Large-scale survey
null
overexpression
unspecified
Resources
12 total interaction(s) for 12 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 1
  • PCA: 7

Genetic Interactions
  • Negative Genetic: 4

Resources
Expression Summary
histogram
Resources
Length (a.a.) 540
Molecular Weight (Da) 59,561
Isoelectric Point (pI) 8.22
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIII:826351 to 824729 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1623 826351..824729 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | TCDB | UniProtKB
Primary SGDIDS000004892
References cited on this page View Complete Literature Guide for YMR279C
1) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
2) Sakaki K, et al.  (2003) Response of genes associated with mitochondrial function to mild heat stress in yeast Saccharomyces cerevisiae. J Biochem 134(3):373-84
3) Kaya A, et al.  (2009) Identification of a novel system for boron transport: Atr1 is a main boron exporter in yeast. Mol Cell Biol 29(13):3665-74
4) Bozdag GO, et al.  (2011) Roles of ATR1 paralogs YMR279c and YOR378w in boron stress tolerance. Biochem Biophys Res Commun 409(4):748-51