| Standard Name | CIN4 1, 2 |
|---|---|
| Systematic Name | YMR138W |
| Alias | GTP1 , UGX1 |
| Feature Type | ORF, Verified |
| Description | GTP-binding protein involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl; regulated by the GTPase-activating protein, Cin2p, the human retinitis pigmentosa 2 (RP2) homolog (1, 3, 4, 5 and see Summary Paragraph) |
| Name Description | Chromosome INstability 1 |
| Chromosomal Location | |
|---|---|
| Genetic position: 86 cM |
| View Computational GO annotations for CIN4 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| High-throughput |
| 108 total interaction(s) for 67 unique genes/features. | |
| Physical Interactions |
|
| Genetic Interactions |
|
| Resources |
|
|
| |
| Resources |
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
|
| |||||||||||||
| Genetic position: 86 cM | |||||||||||||
| Last Update | Coordinates: 2011-02-03 | Sequence: 1996-07-31 | ||||||||||||
| Subfeature details |
| ||||||||||||
| Retrieve sequences | |||||||||||||
| S288C only | |
|---|---|
| S288C vs. other species | |
| S288C vs. other strains |
| External Links | All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
|---|
| Primary SGDID | S000004746 |
|---|
Microtubules are conserved cytoskeletal elements that form by the polymerization of alpha- and beta-tubulin heterodimers. The formation of polymerization-competent alpha- and beta-tubulin heterodimers requires that alpha-tubulin and beta-tubulin be properly folded. Specific cofactors are required for the folding of alpha- and beta-tubulin in vitro and homologs of these cofactors have been found in numerous organisms, including S.cerevisiae (reviewed in 6).
CIN4 is a non-essential gene that encodes a small GTPase of the ras superfamily, ADP-ribosylation factor (ARF) subfamily (4). The human homolog of CIN4, Arl2, has been shown to regulate the activity of the post-chaperonin tubulin folding pathway, in part by decreasing the affinity of cofactor D (Cin1p inS.cerevisiae) for native tubulin (4). By analogy, CIN4 may play a similar regulatory role in the yeast cofactor pathway, as it genetically interacts with several of the yeast tubulin cofactors (e.g. PAC2/cofactor E, CIN1/cofactor D, CIN2/cofactor C) (1, 7), and interacts in the two-hybrid assay with Cin2p/cofactor C (7).
CIN4 was isolated in a genetic screen for mutants that display super-sensitivity to benomyl, a microtubule-depolymerizing drug (1), and was independently isolated in a genetic screen for elevated chromosome loss (3). cin4 null mutants are cold-sensitive, show synthetic phenotypes in combination with tubulin mutants (1) and have defects in nuclear migration and nuclear fusion (or karyogamy) (3).
| 1) | Stearns T, et al. (1990) Yeast mutants sensitive to antimicrotubule drugs define three genes that affect microtubule function. Genetics 124(2):251-62 |
| 2) | Stearns, T. and Botstein, D. (1989) Personal Communication, Mortimer Map Edition 10 |
| 3) | Hoyt MA, et al. (1990) Chromosome instability mutants of Saccharomyces cerevisiae that are defective in microtubule-mediated processes. Mol Cell Biol 10(1):223-34 |
| 4) | Bhamidipati A, et al. (2000) ADP ribosylation factor-like protein 2 (Arl2) regulates the interaction of tubulin-folding cofactor D with native tubulin. J Cell Biol 149(5):1087-96 |
| 5) | Veltel S, et al. (2008) The retinitis pigmentosa 2 gene product is a GTPase-activating protein for Arf-like 3. Nat Struct Mol Biol 15(4):373-80 |
| 6) | Lopez-Fanarraga M, et al. (2001) Review: postchaperonin tubulin folding cofactors and their role in microtubule dynamics. J Struct Biol 135(2):219-29 |
| 7) | Hoyt MA, et al. (1997) Saccharomyces cerevisiae PAC2 functions with CIN1, 2 and 4 in a pathway leading to normal microtubule stability. Genetics 146(3):849-57 |





