| Standard Name | SEG1 1, 2 |
|---|---|
| Systematic Name | YMR086W |
| Feature Type | ORF, Verified |
| Description | Component of eisosome required for proper eisosome assembly; precedes Pil1p/Lsp1p during eisosome formation, controls eisosome length and shape; diffusely distributed, forms heterogeneous patches at plasma membrane in small buds, also found in medium and large buds; expression repressed by cAMP; similar to A. gossypii SEG gene and to S. pombe Sle1p, important for generating eisosomes; SEG1 has a paralog, SEG2, that arose from the whole genome duplication (3, 4, 5, 6, 7, 8, 9) |
| Name Description | Stability of Eisosomes Guaranteed 1 |
| Chromosomal Location | |
|---|---|
Gene Ontology Annotations All SEG1 GO evidence and references
| View Computational GO annotations for SEG1 | |
| Molecular Function | |
| Manually curated |
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| Biological Process | |
| Manually curated |
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| Cellular Component | |
| Manually curated | |
| High-throughput |
Mutant phenotypes All SEG1 Phenotype evidence and references
| Classical genetics | |
|---|---|
| null | |
| Large-scale survey | |
| null | |
| overexpression | |
| Resources |
interactions All SEG1 Interaction evidence and references
| 45 total interaction(s) for 36 unique genes/features. | |
| Physical Interactions |
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| Genetic Interactions |
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| Resources |
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Expression Summary
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| Resources |
Protein Information All SEG1 Protein evidence and references
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
sequence information
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| Last Update | Coordinates: 2011-02-03 | Sequence: 1996-07-31 | ||||||||||||
| Subfeature details |
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| Retrieve sequences | |||||||||||||
Analyze Sequence
| S288C only | |
|---|---|
| S288C vs. other species | |
| S288C vs. other strains |
Resources
| External Links | All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000004692 |
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References cited on this page View Complete Literature Guide for SEG1
| 1) | Seger S and Philippsen P (2010) personal communication |
| 2) | Douglas LM, et al. (2011) Membrane Compartment Occupied by Can1 (MCC) and Eisosome Subdomains of the Fungal Plasma Membrane. Membranes (Basel) 1(4):394-411 |
| 3) | Tadi D, et al. (1999) Selection of genes repressed by cAMP that are induced by nutritional limitation in Saccharomyces cerevisiae. Yeast 15(16):1733-45 |
| 4) | Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 |
| 5) | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 |
| 6) | Byrne KP and Wolfe KH (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61 |
| 7) | Deng C, et al. (2009) Unifying fluorescence microscopy and mass spectrometry for studying protein complexes in cells. Mol Cell Proteomics 8(6):1413-23 |
| 8) | Seger S, et al. (2011) Formation and stability of eisosomes in the filamentous fungus Ashbya gossypii. J Cell Sci 124(Pt 10):1629-34 |
| 9) | Moreira KE, et al. (2012) Seg1 controls eisosome assembly and shape. J Cell Biol 198(3):405-20 |






