TDA4/YJR116W Summary Help

Standard Name TDA4 1
Systematic Name YJR116W
Feature Type ORF, Uncharacterized
Description Putative protein of unknown function; null mutant is sensitive to expression of the top1-T722A allele (1, 2)
Name Description Topoisomerase I Damage Affected 1
Chromosomal Location
ChrX:640825 to 641664 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All TDA4 GO evidence and references
  View Computational GO annotations for TDA4
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
High-throughput
Regulators 4 genes
Resources
Large-scale survey
null
overexpression
Resources
8 total interaction(s) for 8 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 2
  • Co-purification: 1

Genetic Interactions
  • Dosage Lethality: 1
  • Negative Genetic: 1
  • Synthetic Growth Defect: 3

Resources
Expression Summary
histogram
Resources
Length (a.a.) 279
Molecular Weight (Da) 32,011
Isoelectric Point (pI) 10.52
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrX:640825 to 641664 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..840 640825..641664 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003877
References cited on this page View Complete Literature Guide for TDA4
1) Reid RJ, et al.  (2011) Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I-induced DNA damage. Genome Res 21(3):477-86
2) SGD  (2006) No information available