APL1/YJR005W Summary Help

Standard Name APL1 (see Nomenclature conflict Note)
Systematic Name YJR005W
Alias YAP80
Feature Type ORF, Verified
Description Beta-adaptin, large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport; similar to mammalian beta-chain of the clathrin associated protein complex (1, 2, 3, 4)
Name Description clathrin Adaptor Protein complex Large chain
Chromosomal Location
ChrX:445923 to 448025 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All APL1 GO evidence and references
  View Computational GO annotations for APL1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
null
Large-scale survey
null
Resources
85 total interaction(s) for 65 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 13
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 4
  • PCA: 3
  • Two-hybrid: 2

Genetic Interactions
  • Negative Genetic: 58
  • Positive Genetic: 3
  • Synthetic Lethality: 1

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrX:445923 to 448025 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..2103 445923..448025 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003765

NOMENCLATURE CONFLICT NOTE

NameRelevanceDescription
ALP1Nomenclature conflictAPL1 has been used in the literature to refer to both ALP1/YNL270C, which encodes a basic amino acid permease, and APL1/YJR005W, which encodes a beta adaptin.
References cited on this page View Complete Literature Guide for APL1
1) Rad MR, et al.  (1995) Saccharomyces cerevisiae Apl2p, a homologue of the mammalian clathrin AP beta subunit, plays a role in clathrin-dependent Golgi functions. J Cell Sci 108 ( Pt 4)():1605-15
2) Kirchhausen T  (1990) Identification of a putative yeast homolog of the mammalian beta chains of the clathrin-associated protein complexes. Mol Cell Biol 10(11):6089-90
3) Kirchhausen T  (2000) Three ways to make a vesicle. Nat Rev Mol Cell Biol 1(3):187-98
4) Yeung BG, et al.  (1999) Adaptor complex-independent clathrin function in yeast. Mol Biol Cell 10(11):3643-59