GSM1/YJL103C Summary Help

Standard Name GSM1 1
Systematic Name YJL103C
Feature Type ORF, Verified
Description Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis (1, 2, 3, 4)
Name Description Glucose Starvation Modulator 1
Chromosomal Location
ChrX:230881 to 229025 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All GSM1 GO evidence and references
  View Computational GO annotations for GSM1
Molecular Function
Manually curated
High-throughput
Biological Process
Manually curated
Cellular Component
Manually curated
Targets 9 genes
Regulators 3 genes
Resources
Classical genetics
null
Large-scale survey
null
unspecified
Resources
17 total interaction(s) for 17 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 1
  • Biochemical Activity: 2
  • Two-hybrid: 2

Genetic Interactions
  • Negative Genetic: 11
  • Positive Genetic: 1

Resources
Expression Summary
histogram
Resources
Length (a.a.) 618
Molecular Weight (Da) 70,381
Isoelectric Point (pI) 7.85
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrX:230881 to 229025 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1857 230881..229025 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003639
References cited on this page View Complete Literature Guide for GSM1
1) Bakel HV, et al.  (2008) Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification. Nucleic Acids Res 36(4):e21
2) Todd RB and Andrianopoulos A  (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405
3) Deng Y, et al.  (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7
4) Ho SW, et al.  (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5
5) Zhu C, et al.  (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res 19(4):556-66
6) Badis G, et al.  (2008) A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol Cell 32(6):878-87