YJL016W Summary Help

Reserved Name TPH3 1

This name is reserved with SGD according to the Gene Naming Guidelines agreed upon by the yeast community.
For more information about this reservation, please see the Locus History.

Systematic Name YJL016W
Alias YJL017W
Feature Type ORF, Uncharacterized
Description Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; conserved in closely related Saccharomyces species (2, 3, 4)
Name Description Twin PH domain protein number 3 1
Chromosomal Location
ChrX:405588 to 407273 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All YJL016W GO evidence and references
  View Computational GO annotations for YJL016W
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
High-throughput
Regulators 6 genes
Resources
Large-scale survey
null
Resources
21 total interaction(s) for 21 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 1
  • Affinity Capture-RNA: 2
  • PCA: 3
  • Protein-RNA: 1

Genetic Interactions
  • Negative Genetic: 11
  • Positive Genetic: 3

Resources
Expression Summary
histogram
Resources
Length (a.a.) 561
Molecular Weight (Da) 63,206
Isoelectric Point (pI) 7.66
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrX:405588 to 407273 | ORF Map | GBrowse
This feature contains embedded feature(s): YJL017W
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 2003-09-29
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1686 405588..407273 2011-02-03 2003-09-29
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003553
References cited on this page View Complete Literature Guide for YJL016W
1) El Tohamy R, et al.  (2012) New PH domains in yeast ()
2) Kellis M, et al.  (2003) Sequencing and comparison of yeast species to identify genes and regulatory elements. Nature 423(6937):241-54
3) Brachat S, et al.  (2003) Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii. Genome Biol 4(7):R45
4) Huh WK, et al.  (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91