YIP5/YGL161C Summary Help

YIP5 BASIC INFORMATION

Standard Name YIP5 1
Systematic Name YGL161C
Feature Type ORF, Verified
Description Protein that interacts with Rab GTPases, localized to late Golgi vesicles; computational analysis of large-scale protein-protein interaction data suggests a possible role in vesicle-mediated transport (1, 2, 3)
Name Description Ypt-Interacting Protein 2
GO Annotations All YIP5 GO evidence and references
    View Computational GO annotations for YIP5
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Mutant Phenotype All YIP5 Phenotype details and references
Classical genetics
null
Large-scale survey
null
Interactions YIP5 All interactions details and references
43 total interaction(s) for 25 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 2
  • Affinity Capture-Western: 2
  • Biochemical Activity: 2
  • Two-hybrid: 15
Genetic Interactions
  • Phenotypic Enhancement: 15
  • Phenotypic Suppression: 4
  • Synthetic Lethality: 3
Sequence Information
ChrVII:200148 to 199216 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Last Update Coordinates: 2004-07-20 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates		 Chromosomal
Coordinates		 Most Recent Updates
Coordinates Sequence
CDS 1..933 200148..199216 2004-07-20 1996-07-31
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | UniProtKB
Primary SGDIDS000003129

YIP5 RESOURCES

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SGD ORF mapGBrowse
SGD ORF map
 GBrowse
  • Literature
  • Retrieve Sequences
  • Sequence Analysis Tools
  • Protein Info & Structure
  • Localization Resources
  • Interactions
  • Phenotype Resources
  • Maps & Displays
  • Comparison Resources
  • Functional Analysis

Click on histogram for expression summary
Expression Summary histogram

ADDITIONAL INFORMATION for YIP5

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for YIP5]

1) Samanta MP and Liang S  (2003) Predicting protein functions from redundancies in large-scale protein interaction networks. Proc Natl Acad Sci U S A 100(22):12579-83
2) Calero M, et al.  (2002) Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors. FEBS Lett 515(1-3):89-98
3) Inadome H, et al.  (2007) Tvp38, Tvp23, Tvp18 and Tvp15: Novel membrane proteins in the Tlg2-containing Golgi/endosome compartments of Saccharomyces cerevisiae. Exp Cell Res 313(4):688-97