| Standard Name | IPK1 |
|---|---|
| Systematic Name | YDR315C |
| Alias | GSL1 |
| Feature Type | ORF, Verified |
| Description | Inositol 1,3,4,5,6-pentakisphosphate 2-kinase, nuclear protein required for synthesis of 1,2,3,4,5,6-hexakisphosphate (phytate), which is integral to cell function; has 2 motifs conserved in other fungi; ipk1 gle1 double mutant is inviable (1, 2 and see Summary Paragraph) |
| Name Description | Inositol Polyphosphate Kinase 1 |
| Chromosomal Location | |
|---|---|
| Note: this feature is encoded on the Crick strand. | |
| View Computational GO annotations for IPK1 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated |
| Pathways |
|---|
| 318 total interaction(s) for 241 unique genes/features. | |
| Physical Interactions |
|
| Genetic Interactions |
|
| Resources |
|
|
| |
| Resources |
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
| Note: this feature is encoded on the Crick strand. | |||||||||||||
|
| |||||||||||||
| Last Update | Coordinates: 2011-02-03 | Sequence: 1996-07-31 | ||||||||||||
| Subfeature details |
| ||||||||||||
| Retrieve sequences | |||||||||||||
| S288C only | |
|---|---|
| S288C vs. other species | |
| S288C vs. other strains |
| External Links | All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
|---|
| Primary SGDID | S000002723 |
|---|
IPK1 encodes an inositol 2-kinase that converts inositol 1,3,4,5,6-pentakisphosphate (IP5) to inositol 1,2,3,4,5,6-hexakisphosphate (IP6, also known as phytate) (2). Inositol polyphosphates, such as IP5 and IP6, are an important class of signaling molecules that regulate various processes such as transcription, DNA repair, chromatin remodeling, and telomere elongation (reviewed in 3). In particular, IP(6) and Ipk1p activity have been shown to be important for the process of mRNA export (1). Consistent with its role in mRNA export, Ipk1p localizes in the nucleus in a punctate pattern at the nuclear periphery (1). Null mutations in ipk1 result in temperature-sensitive growth, deficient in IP(6) production, accumulation of mRNA in the nucleus, and are lethal when combined a gle1 null mutation (4, 1).
Ipk1p activity is conserved from yeast to man and expression of the plant or human ortholog is able to complement the defects of an ipk1 null strain (4, 5). Knockouts of the mouse ortholog result in embryonic lethality and zebrafish knockdown experiments of 2-kinase activity result in developmental defects, implicating the importance of IP(6) in the development of higher organisms (reviewed in 3).
| 1) | York JD, et al. (1999) A phospholipase C-dependent inositol polyphosphate kinase pathway required for efficient messenger RNA export. Science 285(5424):96-100 |
| 2) | Ives EB, et al. (2000) Biochemical and functional characterization of inositol 1,3,4,5, 6-pentakisphosphate 2-kinases. J Biol Chem 275(47):36575-83 |
| 3) | York JD (2006) Regulation of nuclear processes by inositol polyphosphates. Biochim Biophys Acta 1761(5-6):552-9 |
| 4) | Sweetman D, et al. (2006) Characterization of an Arabidopsis inositol 1,3,4,5,6-pentakisphosphate 2-kinase (AtIPK1). Biochem J 394(Pt 1):95-103 |
| 5) | Verbsky JW, et al. (2002) The synthesis of inositol hexakisphosphate. Characterization of human inositol 1,3,4,5,6-pentakisphosphate 2-kinase. J Biol Chem 277(35):31857-62 |





