RSC3/YDR303C Summary Help

Standard Name RSC3
Systematic Name YDR303C
Feature Type ORF, Verified
Description Component of the RSC chromatin remodeling complex; essential gene required for maintenance of proper ploidy and regulation of ribosomal protein genes and the cell wall/stress response; RSC3 has a paralog, RSC30, that arose from the whole genome duplication (1, 2, 3, 4)
Name Description Remodel the Structure of Chromatin 5
Chromosomal Location
ChrIV:1071386 to 1068729 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All RSC3 GO evidence and references
  View Computational GO annotations for RSC3
Molecular Function
Manually curated
High-throughput
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulatory Role
Binding motifs
    Regulatory modules predicted: cellcycle (239)
    Resources
    Classical genetics
    null
    repressible
    Large-scale survey
    conditional
    null
    overexpression
    reduction of function
    Resources
    155 total interaction(s) for 57 unique genes/features.
    Physical Interactions
    • Affinity Capture-MS: 120
    • Affinity Capture-RNA: 2
    • Affinity Capture-Western: 10
    • Co-purification: 3
    • Reconstituted Complex: 4
    • Two-hybrid: 1

    Genetic Interactions
    • Dosage Lethality: 1
    • Dosage Rescue: 5
    • Phenotypic Enhancement: 1
    • Synthetic Lethality: 7
    • Synthetic Rescue: 1

    Resources
    Expression Summary
    histogram
    Resources
    Localization
    Phosphorylation PhosphoGRID | PhosphoPep Database
    Structure
    Homologs
    sequence information
    ChrIV:1071386 to 1068729 | ORF Map | GBrowse
    Note: this feature is encoded on the Crick strand.
    SGD ORF map
    Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
    Subfeature details
    Relative
    Coordinates
    Chromosomal
    Coordinates
    Most Recent Updates
    Coordinates Sequence
    CDS 1..2658 1071386..1068729 2011-02-03 1996-07-31
    Retrieve sequences
    Analyze Sequence
    S288C only
    S288C vs. other species
    S288C vs. other strains
    Resources
    External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
    Primary SGDIDS000002711
    References cited on this page View Complete Literature Guide for RSC3
    1) Lorch Y, et al.  (1998) Activated RSC-nucleosome complex and persistently altered form of the nucleosome. Cell 94(1):29-34
    2) Neely KE and Workman JL  (2002) The complexity of chromatin remodeling and its links to cancer. Biochim Biophys Acta 1603(1):19-29
    3) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
    4) Campsteijn C, et al.  (2007) Reverse genetic analysis of the yeast RSC chromatin remodeler reveals a role for RSC3 and SNF5 homolog 1 in ploidy maintenance. PLoS Genet 3(6):e92
    5) Cairns BR, et al.  (1996) RSC, an essential, abundant chromatin-remodeling complex. Cell 87(7):1249-60
    6) Badis G, et al.  (2008) A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol Cell 32(6):878-87
    7) Zhu C, et al.  (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res 19(4):556-66