YAP6/YDR259C Summary Help

Standard Name YAP6 1
Systematic Name YDR259C
Alias HAL7 2
Feature Type ORF, Verified
Description Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication (1, 2, 3, 4, 5)
Name Description Yeast homolog of AP-1 1
Chromosomal Location
ChrIV:975782 to 974631 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All YAP6 GO evidence and references
  View Computational GO annotations for YAP6
Molecular Function
Manually curated
High-throughput
Biological Process
Manually curated
Cellular Component
Manually curated
Regulatory Role
Binding motifs Predicted YAP6 Binding Site Locations
    Regulatory modules predicted: stressResponse (499, 427, 415)
    Resources
    Classical genetics
    overexpression
    Large-scale survey
    null
    overexpression
    Resources
    61 total interaction(s) for 59 unique genes/features.
    Physical Interactions
    • Affinity Capture-RNA: 2
    • Affinity Capture-Western: 2
    • Biochemical Activity: 7
    • Two-hybrid: 38

    Genetic Interactions
    • Dosage Growth Defect: 1
    • Dosage Lethality: 1
    • Dosage Rescue: 1
    • Negative Genetic: 8
    • Synthetic Growth Defect: 1

    Resources
    Expression Summary
    histogram
    Resources
    Localization
    Phosphorylation PhosphoGRID | PhosphoPep Database
    Structure
    Homologs
    sequence information
    ChrIV:975782 to 974631 | ORF Map | GBrowse
    Note: this feature is encoded on the Crick strand.
    SGD ORF map
    Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
    Subfeature details
    Relative
    Coordinates
    Chromosomal
    Coordinates
    Most Recent Updates
    Coordinates Sequence
    CDS 1..1152 975782..974631 2011-02-03 1996-07-31
    Retrieve sequences
    Analyze Sequence
    S288C only
    S288C vs. other species
    S288C vs. other strains
    Resources
    External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
    Primary SGDIDS000002667
    References cited on this page View Complete Literature Guide for YAP6
    1) Fernandes L, et al.  (1997) Yap, a novel family of eight bZIP proteins in Saccharomyces cerevisiae with distinct biological functions. Mol Cell Biol 17(12):6982-93
    2) Mendizabal I, et al.  (1998) Yeast putative transcription factors involved in salt tolerance. FEBS Lett 425(2):323-8
    3) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
    4) Ward LD and Bussemaker HJ  (2008) Predicting functional transcription factor binding through alignment-free and affinity-based analysis of orthologous promoter sequences. Bioinformatics 24(13):i165-71
    5) Hanlon SE, et al.  (2011) The Stress Response Factors Yap6, Cin5, Phd1, and Skn7 Direct Targeting of the Conserved Co-Repressor Tup1-Ssn6 in S. cerevisiae. PLoS One 6(4):e19060
    6) Zhu C, et al.  (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res 19(4):556-66