SNU56/YDR240C Summary Help

SNU56 BASIC INFORMATION

Standard Name SNU56
Systematic Name YDR240C
Alias MUD10
Feature Type ORF, Verified
Description Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart; interacts with mRNA in commitment complex (1, 2, 3)
Name Description Small NUclear ribonucleoprotein associated 1
GO Annotations All SNU56 GO evidence and references
    View Computational GO annotations for SNU56
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Mutant Phenotype All SNU56 Phenotype details and references
Large-scale survey
null
Interactions SNU56 All interactions details and references
97 total interaction(s) for 40 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 74
  • Affinity Capture-Western: 2
  • Co-purification: 1
  • PCA: 1
  • Reconstituted Complex: 1
  • Two-hybrid: 6
Genetic Interactions
  • Phenotypic Enhancement: 6
  • Phenotypic Suppression: 1
  • Synthetic Lethality: 5
Sequence Information
ChrIV:945149 to 943671 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Last Update Coordinates: 2008-06-05 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates		 Chromosomal
Coordinates		 Most Recent Updates
Coordinates Sequence
CDS 1..1479 945149..943671 2008-06-05 1996-07-31
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | UniProtKB
Primary SGDIDS000002648

SNU56 RESOURCES

Click on map for expanded view
SGD ORF mapGBrowse
SGD ORF map
 GBrowse
  • Literature
  • Retrieve Sequences
  • Sequence Analysis Tools
  • Protein Info & Structure
  • Localization Resources
  • Interactions
  • Phenotype Resources
  • Maps & Displays
  • Comparison Resources
  • Functional Analysis

Click on histogram for expression summary
Expression Summary histogram

ADDITIONAL INFORMATION for SNU56

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for SNU56]

1) Gottschalk A, et al.  (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA 4(4):374-93
2) Zhang D and Rosbash M  (1999) Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex. Genes Dev 13(5):581-92
3) Stevens SW, et al.  (2002) Composition and functional characterization of the yeast spliceosomal penta-snRNP. Mol Cell 9(1):31-44