NRG1/YDR043C Summary Help

Standard Name NRG1 1
Systematic Name YDR043C
Feature Type ORF, Verified
Description Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; NRG1 has a paralog, NRG2, that arose from the whole genome duplication (1, 2, 3, 4, 5)
Name Description Negative Regulator of Glucose-repressed genes 1, 2
Chromosomal Location
ChrIV:543369 to 542674 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All NRG1 GO evidence and references
  View Computational GO annotations for NRG1
Molecular Function
Manually curated
High-throughput
Biological Process
Manually curated
Cellular Component
Manually curated
Regulatory Role
Binding motifs Predicted NRG1 Binding Site Locations
    Regulatory modules predicted: cellcycle (389)
    Resources
    Classical genetics
    null
    overexpression
    Large-scale survey
    null
    overexpression
    Resources
    176 total interaction(s) for 143 unique genes/features.
    Physical Interactions
    • Affinity Capture-MS: 1
    • Affinity Capture-RNA: 1
    • Affinity Capture-Western: 5
    • Biochemical Activity: 2
    • Two-hybrid: 1

    Genetic Interactions
    • Dosage Growth Defect: 8
    • Dosage Rescue: 1
    • Negative Genetic: 103
    • Phenotypic Enhancement: 4
    • Phenotypic Suppression: 2
    • Positive Genetic: 35
    • Synthetic Growth Defect: 2
    • Synthetic Rescue: 11

    Resources
    Expression Summary
    histogram
    Resources
    Localization
    Phosphorylation PhosphoGRID | PhosphoPep Database
    Structure
    Homologs
    sequence information
    ChrIV:543369 to 542674 | ORF Map | GBrowse
    Note: this feature is encoded on the Crick strand.
    SGD ORF map
    Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
    Subfeature details
    Relative
    Coordinates
    Chromosomal
    Coordinates
    Most Recent Updates
    Coordinates Sequence
    CDS 1..696 543369..542674 2011-02-03 1996-07-31
    Retrieve sequences
    Analyze Sequence
    S288C only
    S288C vs. other species
    S288C vs. other strains
    Resources
    External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
    Primary SGDIDS000002450
    References cited on this page View Complete Literature Guide for NRG1
    1) Zhou H and Winston F  (2001) NRG1 is required for glucose repression of the SUC2 and GAL genes of Saccharomyces cerevisiae. BMC Genet 2():5
    2) Park SH, et al.  (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50
    3) Kuchin S, et al.  (2002) Snf1 protein kinase and the repressors Nrg1 and Nrg2 regulate FLO11, haploid invasive growth, and diploid pseudohyphal differentiation. Mol Cell Biol 22(12):3994-4000
    4) Lamb TM and Mitchell AP  (2003) The transcription factor Rim101p governs ion tolerance and cell differentiation by direct repression of the regulatory genes NRG1 and SMP1 in Saccharomyces cerevisiae. Mol Cell Biol 23(2):677-86
    5) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
    6) Harbison CT, et al.  (2004) Transcriptional regulatory code of a eukaryotic genome. Nature 431(7004):99-104
    7) Zhu C, et al.  (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res 19(4):556-66