| Standard Name | ATP16 |
|---|---|
| Systematic Name | YDL004W |
| Feature Type | ORF, Verified |
| Description | Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated (1, 2 and see Summary Paragraph) |
| Name Description | ATP synthase |
| Chromosomal Location | |
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| View Computational GO annotations for ATP16 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated | |
| High-throughput |
| Classical genetics | |
|---|---|
| null | |
| Large-scale survey | |
| null | |
| reduction of function | |
| Resources |
| 13 total interaction(s) for 10 unique genes/features. | |
| Physical Interactions |
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| Resources |
| Localization | |
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| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
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| Last Update | Coordinates: 2011-02-03 | Sequence: 1996-07-31 | ||||||||||||
| Subfeature details |
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| S288C only | |
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| S288C vs. other species | |
| S288C vs. other strains |
| External Links | All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000002162 |
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ATP16 encodes the delta subunit of mitochondrial ATP synthase and is homologous to the epsilon subunit of bacterial ATP synthase (1). The ATP synthase complex utilizes proton motive force to generate ATP from ADP and Pi (3). The structure of this enzyme complex is highly conserved among diverse organisms and consists of two major components, soluble F1 and membrane-bound F0, each of which contains many subunits. F1 and F0 are connected, both functionally and physically, via two additional multi-subunit structures, the central stalk and the stator stalk. The delta subunit is part of the central stalk, which, like a rotor shaft, transmits the movement of the F0 proton pump to the catalytic core of F1 (4 and references therein).
Although ATP16 is essential for ATP synthase function, it is not essential for life in yeast. Deletion of ATP16, like deletions in many genes necessary for the function or maintenance of mitochondria, leads to a "petite" phenotype that is slow-growing and unable to survive on nonfermentable carbon sources (1).
General ATP synthase structure and function are reviewed in references 3 and 4. For a review that is specific to yeast, see reference 5.
| 1) | Giraud MF and Velours J (1994) ATP synthase of yeast mitochondria. Isolation of the F1 delta subunit, sequence and disruption of the structural gene. Eur J Biochem 222(3):851-9 |
| 2) | Reinders J, et al. (2007) Profiling phosphoproteins of yeast mitochondria reveals a role of phosphorylation in assembly of the ATP synthase. Mol Cell Proteomics 6(11):1896-906 |
| 3) | Boyer PD (1997) The ATP synthase--a splendid molecular machine. Annu Rev Biochem 66:717-49 |
| 4) | Nakamoto RK, et al. (1999) Rotational coupling in the F0F1 ATP synthase. Annu Rev Biophys Biomol Struct 28:205-34 |
| 5) | Devenish RJ, et al. (2000) Insights into ATP synthase assembly and function through the molecular genetic manipulation of subunits of the yeast mitochondrial enzyme complex. Biochim Biophys Acta 1458(2-3):428-42 |





