SIS2/YKR072C Summary Help

Standard Name SIS2 1, 2
Systematic Name YKR072C
Alias HAL3 3
Feature Type ORF, Verified
Description Negative regulatory subunit of protein phosphatase 1 (Ppz1p); also a subunit of phosphopantothenoylcysteine decarboxylase (PPCDC; Cab3p, Sis2p, Vhs3p) complex, which catalyzes the third step of coenzyme A biosynthesis; SIS2 has a paralog, VHS3, that arose from the whole genome duplication (4, 5, 6, 7)
Name Description SIt4 Suppressor 1
Chromosomal Location
ChrXI:578123 to 576435 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Genetic position: 57 cM
Gene Ontology Annotations All SIS2 GO evidence and references
  View Computational GO annotations for SIS2
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Pathways
Mutant phenotypes All SIS2 Phenotype evidence and references
Classical genetics
null
overexpression
Large-scale survey
null
overexpression
Resources
interactions All SIS2 Interaction evidence and references
142 total interaction(s) for 93 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 12
  • Affinity Capture-RNA: 3
  • Affinity Capture-Western: 2
  • Biochemical Activity: 2
  • PCA: 8
  • Reconstituted Complex: 2
  • Two-hybrid: 1
Genetic Interactions
  • Dosage Growth Defect: 10
  • Dosage Lethality: 2
  • Dosage Rescue: 31
  • Negative Genetic: 22
  • Phenotypic Enhancement: 1
  • Phenotypic Suppression: 9
  • Positive Genetic: 2
  • Synthetic Growth Defect: 19
  • Synthetic Lethality: 12
  • Synthetic Rescue: 4
Resources
Expression Summary
histogram
Resources
Protein Information All SIS2 Protein evidence and references
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXI:578123 to 576435 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Genetic position: 57 cM
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates		 Chromosomal
Coordinates		 Most Recent Updates
Coordinates Sequence
CDS 1..1689 578123..576435 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000001780
References cited on this page View Complete Literature Guide for SIS2
1) Di Como CJ, et al.  (1995) Overexpression of SIS2, which contains an extremely acidic region, increases the expression of SWI4, CLN1 and CLN2 in sit4 mutants. Genetics 139(1):95-107
2) Sutton, A. and Arndt, K.  (1992) Personal Communication, Mortimer Map Edition 11
3) Ferrando A, et al.  (1995) Regulation of cation transport in Saccharomyces cerevisiae by the salt tolerance gene HAL3. Mol Cell Biol 15(10):5470-81
4) de Nadal E, et al.  (1998) The yeast halotolerance determinant Hal3p is an inhibitory subunit of the Ppz1p Ser/Thr protein phosphatase. Proc Natl Acad Sci U S A 95(13):7357-62
5) Yenush L, et al.  (2002) The Ppz protein phosphatases are key regulators of K+ and pH homeostasis: implications for salt tolerance, cell wall integrity and cell cycle progression. EMBO J 21(5):920-9
6) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
7) Ruiz A, et al.  (2009) Moonlighting proteins Hal3 and Vhs3 form a heteromeric PPCDC with Ykl088w in yeast CoA biosynthesis. Nat Chem Biol 5(12):920-8