RSC4/YKR008W Summary Help

Standard Name RSC4
Systematic Name YKR008W
Feature Type ORF, Verified
Description Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling; acetylated (K25) by Gcn5p, altering replication stress tolerance; contains tandem bromodomains that recognize histone H3 acetylated on K14 (H3K14ac) by Gcn5p (1, 2, 3, 4, 5, 6)
Name Description Remodel the Structure of Chromatin 7
Chromosomal Location
ChrXI:452201 to 454078 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All RSC4 GO evidence and references
  View Computational GO annotations for RSC4
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
conditional
null
repressible
Large-scale survey
conditional
null
overexpression
reduction of function
repressible
Resources
238 total interaction(s) for 136 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 106
  • Affinity Capture-Western: 10
  • Biochemical Activity: 1
  • Co-crystal Structure: 3
  • Co-purification: 3
  • PCA: 1
  • Protein-peptide: 1
  • Reconstituted Complex: 5
  • Two-hybrid: 1

Genetic Interactions
  • Dosage Growth Defect: 1
  • Dosage Rescue: 1
  • Negative Genetic: 64
  • Phenotypic Enhancement: 1
  • Positive Genetic: 18
  • Synthetic Growth Defect: 1
  • Synthetic Lethality: 15
  • Synthetic Rescue: 6

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXI:452201 to 454078 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 2011-02-03
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1878 452201..454078 2011-02-03 2011-02-03
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000001716
References cited on this page View Complete Literature Guide for RSC4
1) Sengupta SM, et al.  (2001) The interactions of yeast SWI/SNF and RSC with the nucleosome before and after chromatin remodeling. J Biol Chem 276(16):12636-44
2) Lorch Y, et al.  (1998) Activated RSC-nucleosome complex and persistently altered form of the nucleosome. Cell 94(1):29-34
3) Neely KE and Workman JL  (2002) The complexity of chromatin remodeling and its links to cancer. Biochim Biophys Acta 1603(1):19-29
4) Kasten M, et al.  (2004) Tandem bromodomains in the chromatin remodeler RSC recognize acetylated histone H3 Lys14. EMBO J 23(6):1348-59
5) VanDemark AP, et al.  (2007) Autoregulation of the rsc4 tandem bromodomain by gcn5 acetylation. Mol Cell 27(5):817-28
6) Charles GM, et al.  (2011) Site-specific acetylation mark on an essential chromatin-remodeling complex promotes resistance to replication stress. Proc Natl Acad Sci U S A 108(26):10620-5
7) Cairns BR, et al.  (1996) RSC, an essential, abundant chromatin-remodeling complex. Cell 87(7):1249-60