LAC1/YKL008C Summary Help

LAC1 BASIC INFORMATION

Standard Name LAC1
Systematic Name YKL008C
Alias DGT1
Feature Type ORF, Verified
Description Ceramide synthase component, involved in synthesis of ceramide from C26(acyl)-coenzyme A and dihydrosphingosine or phytosphingosine, functionally equivalent to Lag1p (1 and see Summary Paragraph)
Name Description Longevity-Assurance gene Cognate (LAG1 Cognate) 2
GO Annotations All LAC1 GO evidence and references
    View Computational GO annotations for LAC1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Pathways
Mutant Phenotype All LAC1 Phenotype details and references
Large-scale survey
null
Interactions LAC1 All interactions details and references
66 total interaction(s) for 42 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 4
  • Biochemical Activity: 4
  • Co-fractionation: 1
  • PCA: 7
  • Two-hybrid: 30
Genetic Interactions
  • Dosage Rescue: 2
  • Phenotypic Enhancement: 9
  • Phenotypic Suppression: 2
  • Synthetic Growth Defect: 4
  • Synthetic Lethality: 1
  • Synthetic Rescue: 1
Sequence Information
ChrXI:428194 to 426938 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Last Update Coordinates: 2005-12-15 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates		 Chromosomal
Coordinates		 Most Recent Updates
Coordinates Sequence
CDS 1..1257 428194..426938 2005-12-15 1996-07-31
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | UniProtKB
Primary SGDIDS000001491

LAC1 RESOURCES

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SGD ORF map
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Click on histogram for expression summary
Expression Summary histogram

ADDITIONAL INFORMATION for LAC1

SUMMARY PARAGRAPH for LAC1

LAC1 was identified as a close homolog of LAG1, a gene whose expression decreases with increasing age of yeast cells (2). A null lac1 mutant is viable, but a lac1 lag1 double deletion has been reported as lethal (2) or poor-growing (3). Human and C. elegans homologs of LAG1 have been cloned, and each is able to complement a lac1 lag1 double deletion (2). Lac1p and Lag1p have been localized to the endoplasmic reticulum, and are thought to play a role in the transport from the ER to the Golgi of glycosylphosphatidylinositol (GPI)-anchored proteins (3). LAC1 has also been called DGT1 (for "delayed GPI-anchored protein transport," 3), but is not the same as the gene on chromsome IV, MTH1, which has also been called DGT1 (for "decreasing glucose transport").

About sphingolipid metabolism

Sphingolipids are essential components of the plasma membrane in all eukaryotic cells. S. cerevisiae cells make three complex sphingolipids: inositol-phosphoceramide (IPC), mannose-inositol-phosphoceramide (MIPC), and mannose-(inositol phosphate)2-ceramide (M(IP)2C)(4). In the yeast plasma membrane sphingolipids concentrate with ergosterol to form lipid rafts, specialized membrane microdomains implicated in a variety of cellular processes, including sorting of membrane proteins and lipids, as well as organizing and regulating signaling cascades (5). Intermediates in sphingolipid biosynthesis have been shown to play important roles as signaling molecules and growth regulators. Sphingolipid long chain bases (LCBs), dihydrosphingosine (DHS) and phytosphingosine (PHS), have been implicated as secondary messengers in signaling pathways that regulate heat stress response (6, 7). Other intermediates, phytoceramide and long-chain base phosphates (LCBPs), have been shown to be components of the tightly-controlled ceramide/LCBP rheostat, which regulates cell growth (8). Since phosphoinositol-containing sphingolipids are unique to fungi, the sphingolipid biosynthesis pathway is considered a target for antifungal drugs (9, 10).

Last updated: 2007-10-05

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for LAC1]

1) Jazwinski SM  (2002) Growing old: metabolic control and yeast aging. Annu Rev Microbiol 56:769-92
2) Jiang JC, et al.  (1998) Homologs of the yeast longevity gene LAG1 in Caenorhabditis elegans and human. Genome Res 8(12):1259-72
3) Barz WP and Walter P  (1999) Two endoplasmic reticulum (ER) membrane proteins that facilitate ER-to-Golgi transport of glycosylphosphatidylinositol-anchored proteins. Mol Biol Cell 10(4):1043-59
4) Dickson RC and Lester RL  (2002) Sphingolipid functions in Saccharomyces cerevisiae. Biochim Biophys Acta 1583(1):13-25
5) Bagnat M and Simons K  (2002) Lipid rafts in protein sorting and cell polarity in budding yeast Saccharomyces cerevisiae. Biol Chem 383(10):1475-80
6) Jenkins GM, et al.  (1997) Involvement of yeast sphingolipids in the heat stress response of Saccharomyces cerevisiae. J Biol Chem 272(51):32566-72
7) Ferguson-Yankey SR, et al.  (2002) Mutant analysis reveals complex regulation of sphingolipid long chain base phosphates and long chain bases during heat stress in yeast. Yeast 19(7):573-86
8) Kobayashi SD and Nagiec MM  (2003) Ceramide/long-chain base phosphate rheostat in Saccharomyces cerevisiae: regulation of ceramide synthesis by Elo3p and Cka2p. Eukaryot Cell 2(2):284-94
9) Nagiec MM, et al.  (1997) Sphingolipid synthesis as a target for antifungal drugs. Complementation of the inositol phosphorylceramide synthase defect in a mutant strain of Saccharomyces cerevisiae by the AUR1 gene. J Biol Chem 272(15):9809-17
10) Sugimoto Y, et al.  (2004) IPC synthase as a useful target for antifungal drugs. Curr Drug Targets Infect Disord 4(4):311-22