SGN1/YIR001C Summary Help

SGN1 BASIC INFORMATION

Standard Name SGN1 1
Systematic Name YIR001C
Alias RBP1 , RBP29
Feature Type ORF, Verified
Description Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation (2)
Name Description Slower Growth on Non-fermentable carbon sources 1
GO Annotations All SGN1 GO evidence and references
    View Computational GO annotations for SGN1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Mutant Phenotype All SGN1 Phenotype details and references
Classical genetics
overexpression
Large-scale survey
null
overexpression
Interactions SGN1 All interactions details and references
57 total interaction(s) for 34 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 32
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 2
  • Biochemical Activity: 1
  • PCA: 3
  • Two-hybrid: 3
Genetic Interactions
  • Dosage Rescue: 3
  • Phenotypic Enhancement: 6
  • Phenotypic Suppression: 2
  • Synthetic Growth Defect: 4
Sequence Information
ChrIX:356892 to 356140 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Last Update Coordinates: 1994-12-10 | Sequence: 1994-12-10
Subfeature details
Relative
Coordinates		 Chromosomal
Coordinates		 Most Recent Updates
Coordinates Sequence
CDS 1..753 356892..356140 1994-12-10 1994-12-10
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | UniProtKB
Primary SGDIDS000001440

SGN1 RESOURCES

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SGD ORF mapGBrowse
SGD ORF map
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  • Literature
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  • Protein Info & Structure
  • Localization Resources
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  • Functional Analysis

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Expression Summary histogram

ADDITIONAL INFORMATION for SGN1

NOMENCLATURE CONFLICT NOTE

NameRelevanceDescription
FPR1Nomenclature conflictRBP1 has been used to refer to both SGN1/YIR001C, which encodes a poly(A)-binding protein, and FPR1/YNL135C, which encodes a peptidyl-prolyl cis-trans isomerase.
NGR1Nomenclature conflictRBP1 has been used to refer to both NGR1/YBR212W, which encodes an RNA- and single-stranded DNA-binding protein, and SGN1/YIR001C, which encodes a poly(A)-binding protein.

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for SGN1]

1) Entian KD, et al.  (1999) Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach. Mol Gen Genet 262(4-5):683-702
2) Winstall E, et al.  (2000) The Saccharomyces cerevisiae RNA-binding protein Rbp29 functions in cytoplasmic mRNA metabolism. J Biol Chem 275(29):21817-26