VAC8/YEL013W Summary Help

Standard Name VAC8
Systematic Name YEL013W
Alias YEB3
Feature Type ORF, Verified
Description Phosphorylated and palmitoylated vacuolar membrane protein that interacts with Atg13p, required for the cytoplasm-to-vacuole targeting (Cvt) pathway; interacts with Nvj1p to form nucleus-vacuole junctions (1, 2, 3, 4)
Name Description VACuole related
Chromosomal Location
ChrV:128825 to 130561 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All VAC8 GO evidence and references
  View Computational GO annotations for VAC8
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
null
Large-scale survey
null
Resources
150 total interaction(s) for 104 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 11
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 10
  • Biochemical Activity: 3
  • Co-fractionation: 4
  • Co-localization: 2
  • PCA: 12
  • Reconstituted Complex: 4
  • Two-hybrid: 13

Genetic Interactions
  • Negative Genetic: 61
  • Phenotypic Enhancement: 2
  • Phenotypic Suppression: 2
  • Positive Genetic: 8
  • Synthetic Growth Defect: 15
  • Synthetic Lethality: 2

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrV:128825 to 130561 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 1996-07-31 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1737 128825..130561 1996-07-31 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000000739
References cited on this page View Complete Literature Guide for VAC8
1) Pan X, et al.  (2000) Nucleus-vacuole junctions in Saccharomyces cerevisiae are formed through the direct interaction of Vac8p with Nvj1p. Mol Biol Cell 11(7):2445-57
2) Scott SV, et al.  (2000) Apg13p and Vac8p are part of a complex of phosphoproteins that are required for cytoplasm to vacuole targeting. J Biol Chem 275(33):25840-9
3) Wang YX, et al.  (1998) Vac8p, a vacuolar protein with armadillo repeats, functions in both vacuole inheritance and protein targeting from the cytoplasm to vacuole. J Cell Biol 140(5):1063-74
4) Subramanian K, et al.  (2006) Palmitoylation determines the function of Vac8 at the yeast vacuole. J Cell Sci 119(Pt 12):2477-85