VBA3/YCL069W Summary Help

Standard Name VBA3 1
Systematic Name YCL069W
Feature Type ORF, Verified
Description Permease of basic amino acids in the vacuolar membrane; VBA3 has a paralog, VBA5, that arose from a segmental duplication (1, 2)
Name Description Vacuolar Basic Amino acid transporter 1
Chromosomal Location
ChrIII:9706 to 11082 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All VBA3 GO evidence and references
  View Computational GO annotations for VBA3
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 6 genes
Resources
Large-scale survey
null
overexpression
Resources
15 total interaction(s) for 12 unique genes/features.
Physical Interactions
  • PCA: 2

Genetic Interactions
  • Negative Genetic: 11
  • Phenotypic Enhancement: 2

Resources
Expression Summary
histogram
Resources
Length (a.a.) 458
Molecular Weight (Da) 50,225
Isoelectric Point (pI) 9.83
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrIII:9706 to 11082 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2000-09-13 | Sequence: 1997-01-28
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1377 9706..11082 2000-09-13 1997-01-28
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | TCDB | UniProtKB
Primary SGDIDS000000574
References cited on this page View Complete Literature Guide for VBA3
1) Shimazu M, et al.  (2005) A family of basic amino acid transporters of the vacuolar membrane from Saccharomyces cerevisiae. J Biol Chem 280(6):4851-7
2) Katju V, et al.  (2009) Variation in gene duplicates with low synonymous divergence in Saccharomyces cerevisiae relative to Caenorhabditis elegans. Genome Biol 10(7):R75