EDS1/YBR033W Summary Help

Standard Name EDS1 1, 2
Systematic Name YBR033W
Feature Type ORF, Uncharacterized
Description Putative zinc cluster protein, predicted to be a transcription factor; not an essential gene; EDS1 has a paralog, RGT1, that arose from the whole genome duplication (2, 3, 4)
Name Description Expression Dependent on Slt2 2
Chromosomal Location
ChrII:301944 to 304703 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All EDS1 GO evidence and references
  View Computational GO annotations for EDS1
Molecular Function
High-throughput
Biological Process
Manually curated
Cellular Component
Manually curated
Regulators 9 genes
Resources
Classical genetics
null
Large-scale survey
null
overexpression
Resources
80 total interaction(s) for 62 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 2

Genetic Interactions
  • Negative Genetic: 66
  • Phenotypic Enhancement: 1
  • Phenotypic Suppression: 1
  • Positive Genetic: 9
  • Synthetic Growth Defect: 1

Resources
Expression Summary
histogram
Resources
Length (a.a.) 919
Molecular Weight (Da) 103,396
Isoelectric Point (pI) 8.63
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrII:301944 to 304703 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2004-07-16 | Sequence: 1997-01-28
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..2760 301944..304703 2004-07-16 1997-01-28
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000000237
References cited on this page View Complete Literature Guide for EDS1
1) Vidan, S. and Snyder, M.  (2001) personal communication
2) MacPherson S, et al.  (2006) A fungal family of transcriptional regulators: the zinc cluster proteins. Microbiol Mol Biol Rev 70(3):583-604
3) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
4) Yang Y, et al.  (2010) Identifying cooperative transcription factors by combining ChIP-chip data and knockout data. Cell Res 20(11):1276-8
5) Badis G, et al.  (2008) A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol Cell 32(6):878-87