SNC1/YAL030W Summary Help

Standard Name SNC1 1
Systematic Name YAL030W
Feature Type ORF, Verified
Description Vesicle membrane receptor protein (v-SNARE); involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins; SNC1 has a paralog, SNC2, that arose from the whole genome duplication (2, 3, 4, 5)
Name Description Suppressor of the Null allele of CAP 1
Chromosomal Location
ChrI:87286 to 87752 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All SNC1 GO evidence and references
  View Computational GO annotations for SNC1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
overexpression
Large-scale survey
null
overexpression
Resources
108 total interaction(s) for 56 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 3
  • Affinity Capture-RNA: 4
  • Affinity Capture-Western: 33
  • Co-crystal Structure: 2
  • PCA: 1
  • Reconstituted Complex: 3
  • Two-hybrid: 5

Genetic Interactions
  • Dosage Growth Defect: 7
  • Dosage Rescue: 13
  • Negative Genetic: 12
  • Phenotypic Enhancement: 4
  • Synthetic Growth Defect: 5
  • Synthetic Lethality: 12
  • Synthetic Rescue: 4

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrI:87286 to 87752 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..102 87286..87387 2011-02-03 1996-07-31
Intron 103..215 87388..87500 2011-02-03 1996-07-31
CDS 216..467 87501..87752 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000000028
References cited on this page View Complete Literature Guide for SNC1
1) Gerst JE, et al.  (1992) SNC1, a yeast homolog of the synaptic vesicle-associated membrane protein/synaptobrevin gene family: genetic interactions with the RAS and CAP genes. Proc Natl Acad Sci U S A 89(10):4338-42
2) David D, et al.  (1998) Involvement of long chain fatty acid elongation in the trafficking of secretory vesicles in yeast. J Cell Biol 143(5):1167-82
3) Protopopov V, et al.  (1993) Homologs of the synaptobrevin/VAMP family of synaptic vesicle proteins function on the late secretory pathway in S. cerevisiae. Cell 74(5):855-61
4) Gurunathan S, et al.  (2000) Yeast exocytic v-SNAREs confer endocytosis. Mol Biol Cell 11(10):3629-43
5) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61