| Standard Name | SWC3 1 (see Nomenclature conflict Note) |
|---|---|
| Systematic Name | YAL011W |
| Alias | SWC1 |
| Feature Type | ORF, Verified |
| Description | Protein of unknown function, component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae (2, 3, 4) |
| Name Description | SWr Complex |
| Chromosomal Location | |
|---|---|
Gene Ontology Annotations All SWC3 GO evidence and references
| View Computational GO annotations for SWC3 | |
| Molecular Function | |
| Manually curated |
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| Biological Process | |
| Manually curated | |
| High-throughput | |
| Cellular Component | |
| Manually curated | |
| High-throughput |
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Mutant phenotypes All SWC3 Phenotype evidence and references
interactions All SWC3 Interaction evidence and references
| 609 total interaction(s) for 321 unique genes/features. | |
| Physical Interactions |
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| Genetic Interactions |
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| Resources |
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Expression Summary
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| Resources |
Protein Information All SWC3 Protein evidence and references
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
sequence information
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| Last Update | Coordinates: 2011-02-03 | Sequence: 2003-09-22 | ||||||||||||
| Subfeature details |
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Analyze Sequence
| S288C only | |
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| S288C vs. other species | |
| S288C vs. other strains |
Resources
| External Links | All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000000009 |
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NOMENCLATURE CONFLICT NOTE
| Name | Relevance | Description |
|---|---|---|
| ALR1 | Nomenclature conflict | SWC3 has been used to refer to both SWC3/YAL011W, whose gene product is involved in chromatin remodeling and ER biogenesis, and ALR1/YOL130W, a plasma membrane transporter. |
References cited on this page View Complete Literature Guide for SWC3
| 1) | Schaft, D, et al. (2002) personal communication |
| 2) | Wright R, et al. (2003) Parallel analysis of tagged deletion mutants efficiently identifies genes involved in endoplasmic reticulum biogenesis. Yeast 20(10):881-92 |
| 3) | Krogan NJ, et al. (2003) A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1. Mol Cell 12(6):1565-76 |
| 4) | Mizuguchi G, et al. (2004) ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. Science 303(5656):343-8 |






