YDR316W-B Physical and Genetic Interactions

This page lists genes/proteins that interact with YDR316W-B. See help for information about interaction data.

Interactions for YDR316W-B (4)
Feature	Gene	Description	Experiment Type	Type	Action	Source	Annotation Type	Modification	Phenotype	Note	Reference
YKL049C	CSE4	Centromere protein that resembles histone H3	Affinity Capture-MS	physical interactions	Bait	BioGRID	high-throughput				Ranjitkar P, et al. (2010) An E3 Ubiquitin Ligase Prevents Ectopic Localization of the Centromeric Histone H3 Variant via the Centromere Targeting Domain. Mol Cell 40(3):455-64
YGL122C	NAB2	Nuclear polyadenylated RNA-binding protein	Affinity Capture-RNA	physical interactions	Bait	BioGRID	high-throughput			High Throughput: The experiment involved high-throughput sequencing of the RNAs that co-precipitated with TAP-tagged Nab2 (Nab2-TAP)	Batisse J, et al. (2009) Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. J Biol Chem 284(50):34911-7
YFR004W	RPN11	Metalloprotease subunit of the 19S regulatory particle of the 26S pro	Affinity Capture-MS	physical interactions	Bait	BioGRID	high-throughput			Proteasome interacting proteins (PIPs) were identified using QTAX (quantitative analysis of tandem affinity purified in vivo cross-linked (X) protein complexes)	Kaake RM, et al. (2010) Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy. J Proteome Res 9(4):2016-29
YLL039C	UBI4	Ubiquitin	Affinity Capture-MS	physical interactions	Bait	BioGRID	high-throughput			Candidate ubiquitin substrates were identified using ubiquitin remnant immunoaffinity profiling	Starita LM, et al. (2012) Sites of ubiquitin attachment in Saccharomyces cerevisiae. Proteomics 12(2):236-40