SNR17A/snR17a Physical and Genetic Interactions Help

This page lists genes/proteins that interact with SNR17A. See help for information about interaction data.

Javascript version (sortable tables)

Interactions for SNR17A/snR17a (25)
Feature Gene Description Experiment Type Type Action Source Annotation Type Modification Phenotype Note Reference
YPL217C BMS1 GTPase required for ribosomal subunit synthesis and rRNA processing Affinity Capture-RNA physical interactions Bait BioGRID manually curated Perez-Fernandez J, et al. (2011) Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes. Nucleic Acids Res 39(18):8105-21
YHR089C GAR1 Protein component of the H/ACA snoRNP pseudouridylase complex Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YNL030W HHF2 Histone H4 Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YDR224C HTB1 Histone H2B Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YBL002W HTB2 Histone H2B Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YHR148W IMP3 Component of the SSU processome Affinity Capture-RNA physical interactions Bait BioGRID manually curated Marmier-Gourrier N, et al. (2011) A second base pair interaction between U3 small nucleolar RNA and the 5'-ETS region is required for early cleavage of the yeast pre-ribosomal RNA. Nucleic Acids Res 39(22):9731-45
YNL075W IMP4 Component of the SSU processome Affinity Capture-RNA physical interactions Bait BioGRID manually curated Marmier-Gourrier N, et al. (2011) A second base pair interaction between U3 small nucleolar RNA and the 5'-ETS region is required for early cleavage of the yeast pre-ribosomal RNA. Nucleic Acids Res 39(22):9731-45
YNL075W IMP4 Component of the SSU processome Affinity Capture-RNA physical interactions Bait BioGRID manually curated Perez-Fernandez J, et al. (2011) Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes. Nucleic Acids Res 39(18):8105-21
YNL308C KRI1 Essential nucleolar protein required for 40S ribosome biogenesis Co-fractionation physical interactions Bait BioGRID manually curated Hoareau-Aveilla C, et al. (2012) Utp23p is required for dissociation of snR30 small nucleolar RNP from preribosomal particles. Nucleic Acids Res 40(8):3641-52
YDR060W MAK21 Constituent of 66S pre-ribosomal particles Affinity Capture-RNA physical interactions Bait BioGRID manually curated Hierlmeier T, et al. (2013) Rrp5p, Noc1p and Noc2p form a protein module which is part of early large ribosomal subunit precursors in S. cerevisiae. Nucleic Acids Res 41(2):1191-210
YJR002W MPP10 Component of the SSU processome and 90S preribosome Affinity Capture-RNA physical interactions Bait BioGRID manually curated Marmier-Gourrier N, et al. (2011) A second base pair interaction between U3 small nucleolar RNA and the 5'-ETS region is required for early cleavage of the yeast pre-ribosomal RNA. Nucleic Acids Res 39(22):9731-45
YPL190C NAB3 RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) Affinity Capture-RNA physical interactions Bait BioGRID high-throughput interaction detected by PAR-CLIP Creamer TJ, et al. (2011) Transcriptome-Wide Binding Sites for Components of the Saccharomyces cerevisiae Non-Poly(A) Termination Pathway: Nrd1, Nab3, and Sen1. PLoS Genet 7(10):e1002329
YOR206W NOC2 Protein that binds to pre-ribosomes Affinity Capture-RNA physical interactions Bait BioGRID manually curated Hierlmeier T, et al. (2013) Rrp5p, Noc1p and Noc2p form a protein module which is part of early large ribosomal subunit precursors in S. cerevisiae. Nucleic Acids Res 41(2):1191-210
YDL213C NOP6 rRNA-binding protein required for 40S ribosomal subunit biogenesis Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YDR450W RPS18A Protein component of the small (40S) ribosomal subunit Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YML026C RPS18B Protein component of the small (40S) ribosomal subunit Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YPL081W RPS9A Protein component of the small (40S) ribosomal subunit Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YBR189W RPS9B Protein component of the small (40S) ribosomal subunit Affinity Capture-RNA physical interactions Bait BioGRID manually curated Lemay V, et al. (2011) Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Res 39(22):9659-70
YMR229C RRP5 RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs Affinity Capture-RNA physical interactions Bait BioGRID manually curated Hierlmeier T, et al. (2013) Rrp5p, Noc1p and Noc2p form a protein module which is part of early large ribosomal subunit precursors in S. cerevisiae. Nucleic Acids Res 41(2):1191-210
YBL004W UTP20 Component of the small-subunit (SSU) processome Affinity Capture-RNA physical interactions Bait BioGRID manually curated Perez-Fernandez J, et al. (2011) Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes. Nucleic Acids Res 39(18):8105-21
YLR409C UTP21 Subunit of U3-containing 90S preribosome and SSU processome Affinity Capture-RNA physical interactions Bait BioGRID manually curated Charette JM and Baserga SJ (2010) The DEAD-box RNA helicase-like Utp25 is an SSU processome component. RNA 16(11):2156-69
YGR090W UTP22 Component of the small-subunit processome Affinity Capture-RNA physical interactions Bait BioGRID manually curated Hierlmeier T, et al. (2013) Rrp5p, Noc1p and Noc2p form a protein module which is part of early large ribosomal subunit precursors in S. cerevisiae. Nucleic Acids Res 41(2):1191-210
YOR004W UTP23 Component of the small subunit processome, involved in 40S ribosomal Co-fractionation physical interactions Bait BioGRID manually curated Hoareau-Aveilla C, et al. (2012) Utp23p is required for dissociation of snR30 small nucleolar RNP from preribosomal particles. Nucleic Acids Res 40(8):3641-52
YIL091C UTP25 Nucleolar protein required for 35S pre-RNA processing and 40S ribosom Affinity Capture-RNA physical interactions Bait BioGRID manually curated Charette JM and Baserga SJ (2010) The DEAD-box RNA helicase-like Utp25 is an SSU processome component. RNA 16(11):2156-69
YDR449C UTP6 Nucleolar protein Affinity Capture-RNA physical interactions Bait BioGRID manually curated Charette JM and Baserga SJ (2010) The DEAD-box RNA helicase-like Utp25 is an SSU processome component. RNA 16(11):2156-69