Restriction Fragments for SWI5/YDR146C



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The currently selected gene/sequence is :

SWI5/YDR146C on chromosome IV from coordinates 750742 to 748613.

The sequence you have requested is oriented with respect to the Crick (bottom) strand. Thus, the chromosomal coordinate of the beginning of the gene or sequence is larger than that of the end. The sequence shown here is the 5'-3' direction of the Crick strand and is the reverse complement of the Watson (top) strand.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.2.26233.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 29 32 + MnlI CCTC 39 38 . . 25 29 - SfaNI GCATC 15 19 . . 36 41 + TatI WGTACW 36 40 . . 37 40 + Csp6I GTAC 37 39 . . 37 40 + RsaI GTAC 38 38 . . 43 46 + CviJI RGCY 44 44 . . 48 53 + ApoI RAATTY 48 52 . . 49 52 + TspEI AATT 48 52 . . 56 59 + SetI ASST 59 55 . . 86 89 + MaeI CTAG 86 88 . . 89 92 - MnlI CCTC 82 81 . . 92 97 + BtsI GCAGTG 99 97 . . 93 99 + TspRI CASTGNN 99 90 . . 95 99 + Tsp45I GTSAC 94 99 . . 95 99 + MaeIII GTNAC 94 99 . . 100 104 + Hin4II* CCTTC 110 109 . . 103 106 + TaqI TCGA 103 105 . . 111 114 + CviRI* TGCA 112 112 . . 118 122 - Hin4II* CCTTC 112 111 . . 136 139 + MaeI CTAG 136 138 . . 167 170 + SetI ASST 170 166 . . 178 182 + HphI GGTGA 190 189 . . 194 199 + PsiI TTATAA 196 196 . . 199 203 + TspDTI ATGAA 214 212 . . 203 207 + TspDTI ATGAA 218 216 . . 217 220 + MseI TTAA 217 219 . . 221 224 + SetI ASST 224 220 . . 222 226 + Hin4II* CCTTC 232 231 . . 222 232 + BsiYI* CCNNNNNNNGG 228 225 . . 226 231 + NspBII* CMGCKG 228 228 . . 226 229 + AciI CCGC 226 228 . . 231 235 + BslFI GGGAC 245 249 . . 231 236 + NlaIV GGNNCC 233 233 . . 232 236 + BmgT120I GGNCC 233 234 . . 232 236 + AvaII GGWCC 232 235 . . 232 236 + AsuI* GGNCC 232 235 . . 228 233 - GsaI CCCAGC 232 228 . . 228 233 - BseYI CCCAGC 228 232 . . 241 245 + Hpy188I TCNGA 243 242 . . 244 254 + Hin4I GAYNNNNNVTC 235 230 267 262 245 249 + TspDTI ATGAA 260 258 . . 244 254 - Hin4I GAYNNNNNVTC 267 262 235 230 260 263 + SetI ASST 263 259 . . 274 278 + Hpy188I TCNGA 276 275 . . 280 283 + MseI TTAA 280 282 . . 304 308 + TspDTI ATGAA 319 317 . . 315 319 + DdeI CTNAG 315 318 . . 325 328 + TspEI AATT 324 328 . . 328 333 + Hpy178III* TCNNGA 329 331 . . 337 341 + Tsp45I GTSAC 336 341 . . 337 341 + MaeIII GTNAC 336 341 . . 339 343 + HinfI GANTC 339 342 . . 339 343 - PleI GAGTC 333 334 . . 339 343 - MlyI GAGTC 333 333 . . 348 351 + CviRI* TGCA 349 349 . . 353 356 + MaeI CTAG 353 355 . . 355 358 + SetI ASST 358 354 . . 355 358 + CviJI RGCY 356 356 . . 355 358 + AluI AGCT 356 356 . . 365 369 + TspDTI ATGAA 380 378 . . 376 379 + MseI TTAA 376 378 . . 381 386 + Hpy178III* TCNNGA 382 384 . . 386 390 + Tsp4CI* ACNGT 388 387 . . 387 393 + TspRI CASTGNN 393 384 . . 396 406 + Hin4I GAYNNNNNVTC 387 382 419 414 397 401 + Tsp4CI* ACNGT 399 398 . . 396 406 - Hin4I GAYNNNNNVTC 419 414 387 382 425 428 + CviJI RGCY 426 426 . . 434 438 + TspDTI ATGAA 449 447 . . 441 445 + MboII GAAGA 453 452 . . 449 454 + DsaI* CCRYGG 449 453 . . 449 454 + StyI CCWWGG 449 453 . . 449 454 + NcoI CCATGG 449 453 . . 449 454 + SecI* CCNNGG 449 453 . . 450 453 + FatI CATG 449 453 . . 450 453 + NlaIII CATG 453 449 . . 450 453 + CviAII CATG 450 452 . . 453 458 + EciI GGCGGA 469 467 . . 454 457 - AciI CCGC 454 456 . . 460 463 + TspEI AATT 459 463 . . 468 473 + SalI GTCGAC 468 472 . . 468 473 + Hpy166II GTNNAC 470 470 . . 468 473 + HindII GTYRAC 470 470 . . 468 473 + AccI GTMKAC 469 471 . . 469 472 + TaqI TCGA 469 471 . . 489 492 + TspEI AATT 488 492 . . 490 495 + VspI ATTAAT 491 493 . . 491 494 + MseI TTAA 491 493 . . 499 502 + CviJI RGCY 500 500 . . 503 506 + TaqI TCGA 503 505 . . 512 515 + SetI ASST 515 511 . . 513 516 + MnlI CCTC 523 522 . . 513 518 + SecI* CCNNGG 513 517 . . 514 519 + BmeT110I CYCGRG 515 517 . . 514 519 + AvaI CYCGRG 514 518 . . 521 524 + TspEI AATT 520 524 . . 525 529 + Tsp4CI* ACNGT 527 526 . . 528 532 + MaeIII GTNAC 527 532 . . 549 552 + Hin6I GCGC 549 551 . . 549 552 + GlaI GCGC 550 550 . . 549 552 + HhaI GCGC 551 549 . . 550 553 + FnuDII* CGCG 551 551 . . 551 556 + Cac8I GCNNGC 553 553 . . 556 561 + MfeI CAATTG 556 560 . . 557 560 + TspEI AATT 556 560 . . 563 568 + SduI GDGCHC 567 563 . . 563 568 + HgiAI* GWGCWC 567 563 . . 576 579 + CviJI RGCY 577 577 . . 574 577 - MnlI CCTC 567 566 . . 631 636 + SfeI* CTRYAG 631 635 . . 636 639 + CviJI RGCY 637 637 . . 640 643 + SetI ASST 643 639 . . 642 646 + DdeI CTNAG 642 645 . . 652 656 + Hpy188I TCNGA 654 653 . . 658 662 + BmgT120I GGNCC 659 660 . . 658 662 + AvaII GGWCC 658 661 . . 658 662 + AsuI* GGNCC 658 661 . . 659 664 + Hpy166II GTNNAC 661 661 . . 655 659 - BccI CCATC 649 650 . . 663 667 + Tsp4CI* ACNGT 665 664 . . 684 688 + MboII GAAGA 696 695 . . 686 691 + XhoII RGATCY 686 690 . . 686 691 + BglII AGATCT 686 690 . . 687 690 + DpnI GATC 688 688 . . 687 690 + BstKTI GATC 689 687 . . 687 690 + MboI GATC 686 690 . . 700 704 + Hpy188I TCNGA 702 701 . . 698 703 - Eco57MI CTGRAG 683 681 . . 698 703 - Eco57I CTGAAG 683 681 . . 714 718 + FokI GGATG 727 731 . . 714 718 + BseGI GGATG 720 718 . . 712 715 - MnlI CCTC 705 704 . . 718 723 + Hpy166II GTNNAC 720 720 . . 718 723 + BssNAI GTATAC 720 720 . . 718 723 + AccI GTMKAC 719 721 . . 730 733 + CviJI RGCY 731 731 . . 736 740 - HphI GGTGA 728 727 . . 771 776 + Hpy166II GTNNAC 773 773 . . 774 780 + TspRI CASTGNN 780 771 . . 775 779 + BsrI ACTGG 780 778 . . 775 780 + BfiI ACTGGG 785 784 . . 779 785 + BstEII GGTNACC 779 784 . . 780 784 + Tsp45I GTSAC 779 784 . . 780 784 + MaeIII GTNAC 779 784 . . 783 786 + SetI ASST 786 782 . . 784 788 + Hin4II* CCTTC 794 793 . . 781 785 - HphI GGTGA 773 772 . . 788 791 + MaeI CTAG 788 790 . . 809 814 + TatI WGTACW 809 813 . . 809 814 + ScaI AGTACT 811 811 . . 810 813 + Csp6I GTAC 810 812 . . 810 813 + RsaI GTAC 811 811 . . 815 820 + Cac8I GCNNGC 817 817 . . 817 822 + PstI CTGCAG 821 817 . . 817 822 + SfeI* CTRYAG 817 821 . . 818 821 + CviRI* TGCA 819 819 . . 833 836 + MaeI CTAG 833 835 . . 839 842 + Csp6I GTAC 839 841 . . 839 842 + RsaI GTAC 840 840 . . 841 845 + Tsp4CI* ACNGT 843 842 . . 842 847 + SfeI* CTRYAG 842 846 . . 847 851 + BmgT120I GGNCC 848 849 . . 847 851 + AvaII GGWCC 847 850 . . 847 851 + AsuI* GGNCC 847 850 . . 851 862 + TstI CACNNNNNNTCC 842 837 874 869 860 866 + PfoI TCCNGGA 860 865 . . 861 865 + BssKI CCNGG 860 865 . . 861 865 + BseBI CCWGG 862 863 . . 861 865 + ScrFI CCNGG 862 863 . . 861 865 + EcoRII CCWGG 860 865 . . 866 869 + TspEI AATT 865 869 . . 876 879 + SetI ASST 879 875 . . 874 878 - Hin4II* CCTTC 868 867 . . 886 890 + HinfI GANTC 886 889 . . 886 890 - PleI GAGTC 880 881 . . 886 890 - MlyI GAGTC 880 880 . . 891 894 + MnlI CCTC 901 900 . . 898 902 - HphI GGTGA 890 889 . . 908 913 + ApoI RAATTY 908 912 . . 909 912 + TspEI AATT 908 912 . . 916 919 + TaqI TCGA 916 918 . . 918 922 + TfiI GAWTC 918 921 . . 918 922 + HinfI GANTC 918 921 . . 926 930 + TspDTI ATGAA 941 939 . . 932 935 + SetI ASST 935 931 . . 933 936 + MnlI CCTC 943 942 . . 934 938 + DdeI CTNAG 934 937 . . 934 938 + BspCNI CTCAG 947 945 . . 934 938 + BseMII CTCAG 948 946 . . 949 954 + ApoI RAATTY 949 953 . . 950 953 + TspEI AATT 949 953 . . 962 966 + Hin4II* CCTTC 972 971 . . 977 989 - PsrI GAACNNNNNNTAC 1001 996 969 964 990 993 + SetI ASST 993 989 . . 990 993 + CviJI RGCY 991 991 . . 990 993 + AluI AGCT 991 991 . . 994 997 + TaiI ACGT 997 993 . . 994 997 + SetI ASST 997 993 . . 994 997 + MaeII ACGT 994 996 . . 997 1002 + MmeI TCCRAC 1022 1020 . . 1026 1031 + SmlI CTYRAG 1026 1030 . . 1026 1031 + AflII CTTAAG 1026 1030 . . 1027 1030 + MseI TTAA 1027 1029 . . 1030 1033 + SetI ASST 1033 1029 . . 1040 1045 + Hpy178III* TCNNGA 1041 1043 . . 1045 1050 + VspI ATTAAT 1046 1048 . . 1046 1049 + MseI TTAA 1046 1048 . . 1054 1058 + MboII GAAGA 1066 1065 . . 1057 1060 + DpnI GATC 1058 1058 . . 1057 1060 + BstKTI GATC 1059 1057 . . 1057 1060 + MboI GATC 1056 1060 . . 1059 1064 + Hpy178III* TCNNGA 1060 1062 . . 1070 1075 + SspI AATATT 1072 1072 . . 1075 1079 + Hpy188I TCNGA 1077 1076 . . 1083 1086 + SetI ASST 1086 1082 . . 1089 1093 + BmgT120I GGNCC 1090 1091 . . 1089 1093 + AsuI* GGNCC 1089 1092 . . 1090 1093 + CviJI RGCY 1091 1091 . . 1090 1093 + HaeIII GGCC 1091 1091 . . 1092 1096 + BssKI CCNGG 1091 1096 . . 1092 1096 + BseBI CCWGG 1093 1094 . . 1092 1097 + SecI* CCNNGG 1092 1096 . . 1092 1096 + ScrFI CCNGG 1093 1094 . . 1092 1096 + EcoRII CCWGG 1091 1096 . . 1116 1122 + SexAI ACCWGGT 1116 1121 . . 1117 1121 + BssKI CCNGG 1116 1121 . . 1117 1121 + BseBI CCWGG 1118 1119 . . 1117 1121 + ScrFI CCNGG 1118 1119 . . 1117 1121 + EcoRII CCWGG 1116 1121 . . 1119 1122 + SetI ASST 1122 1118 . . 1119 1125 + PpuMI RGGWCCY 1120 1123 . . 1119 1125 + DraII RGGNCCY 1120 1123 . . 1120 1124 + BmgT120I GGNCC 1121 1122 . . 1120 1124 + AvaII GGWCC 1120 1123 . . 1120 1124 + AsuI* GGNCC 1120 1123 . . 1123 1127 + Hin4II* CCTTC 1133 1132 . . 1139 1145 + TspRI CASTGNN 1145 1136 . . 1146 1151 + AhaIII* TTTAAA 1148 1148 . . 1147 1150 + MseI TTAA 1147 1149 . . 1179 1182 + TspEI AATT 1178 1182 . . 1183 1187 + BssKI CCNGG 1182 1187 . . 1183 1187 + BseBI CCWGG 1184 1185 . . 1183 1188 + SecI* CCNNGG 1183 1187 . . 1183 1187 + ScrFI CCNGG 1184 1185 . . 1183 1187 + EcoRII CCWGG 1182 1187 . . 1204 1208 + BccI CCATC 1212 1213 . . 1217 1227 + FalI AAGNNNNNCTT 1208 1203 1240 1235 1219 1224 + BciVI GTATCC 1230 1229 . . 1217 1227 - FalI AAGNNNNNCTT 1240 1235 1208 1203 1229 1232 + MnlI CCTC 1239 1238 . . 1230 1235 - Eco57MI CTGRAG 1215 1213 . . 1230 1235 - GsuI CTGGAG 1215 1213 . . 1232 1236 - BsrI ACTGG 1232 1230 . . 1260 1263 + SetI ASST 1263 1259 . . 1259 1262 - MnlI CCTC 1252 1251 . . 1269 1273 + MaeIII GTNAC 1268 1273 . . 1279 1282 + SetI ASST 1282 1278 . . 1279 1282 + CviJI RGCY 1280 1280 . . 1279 1282 + AluI AGCT 1280 1280 . . 1287 1293 + TspRI CASTGNN 1293 1284 . . 1293 1298 + BsmI GAATGC 1299 1297 . . 1295 1300 + EcoT22I ATGCAT 1299 1295 . . 1296 1299 + CviRI* TGCA 1297 1297 . . 1312 1316 + BlsI GCNGC 1314 1313 . . 1312 1316 + BisI GCNGC 1313 1314 . . 1312 1316 + TseI GCWGC 1312 1315 . . 1312 1316 - BbvI GCAGC 1299 1303 . . 1317 1327 + Hin4I GAYNNNNNVTC 1308 1303 1340 1335 1317 1327 - Hin4I GAYNNNNNVTC 1340 1335 1308 1303 1331 1334 + CviJI RGCY 1332 1332 . . 1332 1336 + TauI GCSGC 1335 1332 . . 1332 1336 + BlsI GCNGC 1334 1333 . . 1332 1336 + BisI GCNGC 1333 1334 . . 1333 1336 + AciI CCGC 1333 1335 . . 1335 1340 + NmeAIII GCCGAG 1361 1359 . . 1335 1345 + MwoI GCNNNNNNNGC 1341 1338 . . 1339 1342 + CviJI RGCY 1340 1340 . . 1340 1345 + Cac8I GCNNGC 1342 1342 . . 1344 1349 + Cac8I GCNNGC 1346 1346 . . 1356 1361 + Hpy178III* TCNNGA 1357 1359 . . 1360 1364 - Hin4II* CCTTC 1354 1353 . . 1389 1394 + TatI WGTACW 1389 1393 . . 1390 1393 + Csp6I GTAC 1390 1392 . . 1390 1393 + RsaI GTAC 1391 1391 . . 1412 1416 + TspDTI ATGAA 1427 1425 . . 1414 1418 - Hin4II* CCTTC 1408 1407 . . 1429 1432 - MnlI CCTC 1422 1421 . . 1439 1442 + CviJI RGCY 1440 1440 . . 1462 1466 + Hpy188I TCNGA 1464 1463 . . 1468 1478 + BsaXI ACNNNNNCTCC 1458 1455 1488 1485 1471 1475 + Hin4II* CCTTC 1481 1480 . . 1483 1488 + SmlI CTYRAG 1483 1487 . . 1483 1488 + AflII CTTAAG 1483 1487 . . 1484 1487 + MseI TTAA 1484 1486 . . 1488 1492 + Tsp45I GTSAC 1487 1492 . . 1488 1492 + MaeIII GTNAC 1487 1492 . . 1500 1503 + Csp6I GTAC 1500 1502 . . 1500 1503 + RsaI GTAC 1501 1501 . . 1508 1512 + MboII GAAGA 1520 1519 . . 1504 1508 - Hin4II* CCTTC 1498 1497 . . 1510 1515 + XhoII RGATCY 1510 1514 . . 1510 1515 + BglII AGATCT 1510 1514 . . 1511 1514 + DpnI GATC 1512 1512 . . 1511 1514 + BstKTI GATC 1513 1511 . . 1511 1514 + MboI GATC 1510 1514 . . 1516 1519 + MnlI CCTC 1526 1525 . . 1516 1526 + BsiYI* CCNNNNNNNGG 1522 1519 . . 1514 1519 - BseRI GAGGAG 1505 1503 . . 1520 1523 + TspEI AATT 1519 1523 . . 1535 1538 + MseI TTAA 1535 1537 . . 1557 1568 + TstI CACNNNNNNTCC 1548 1543 1580 1575 1568 1571 + MnlI CCTC 1578 1577 . . 1565 1569 - BslFI GGGAC 1550 1554 . . 1595 1601 + TspRI CASTGNN 1601 1592 . . 1595 1600 - BtsI GCAGTG 1594 1592 . . 1605 1608 + SetI ASST 1608 1604 . . 1604 1607 - MnlI CCTC 1597 1596 . . 1612 1617 + ClaI ATCGAT 1613 1615 . . 1613 1616 + TaqI TCGA 1613 1615 . . 1604 1614 - Hin4I GAYNNNNNVTC 1627 1622 1595 1590 1626 1630 - Hin4II* CCTTC 1620 1619 . . 1646 1655 + MslI CAYNNNNRTG 1650 1650 . . 1662 1668 + PfoI TCCNGGA 1662 1667 . . 1663 1667 + BssKI CCNGG 1662 1667 . . 1663 1667 + BseBI CCWGG 1664 1665 . . 1663 1667 + ScrFI CCNGG 1664 1665 . . 1663 1667 + EcoRII CCWGG 1662 1667 . . 1666 1670 + FokI GGATG 1679 1683 . . 1666 1670 + BseGI GGATG 1672 1670 . . 1669 1674 + TatI WGTACW 1669 1673 . . 1669 1674 + Bsp1407I TGTACA 1669 1673 . . 1670 1673 + Csp6I GTAC 1670 1672 . . 1670 1673 + RsaI GTAC 1671 1671 . . 1682 1687 + Hpy178III* TCNNGA 1683 1685 . . 1690 1693 + SetI ASST 1693 1689 . . 1688 1692 - Hin4II* CCTTC 1682 1681 . . 1700 1704 + Hpy188I TCNGA 1702 1701 . . 1702 1707 + XhoII RGATCY 1702 1706 . . 1702 1707 + BglII AGATCT 1702 1706 . . 1703 1706 + DpnI GATC 1704 1704 . . 1703 1706 + BstKTI GATC 1705 1703 . . 1703 1706 + MboI GATC 1702 1706 . . 1726 1730 + MboII GAAGA 1738 1737 . . 1729 1732 + DpnI GATC 1730 1730 . . 1729 1732 + BstKTI GATC 1731 1729 . . 1729 1732 + MboI GATC 1728 1732 . . 1732 1737 + CfrI YGGCCR 1732 1736 . . 1733 1736 + CviJI RGCY 1734 1734 . . 1733 1736 + HaeIII GGCC 1734 1734 . . 1746 1751 + BclI TGATCA 1746 1750 . . 1747 1750 + DpnI GATC 1748 1748 . . 1747 1750 + BstKTI GATC 1749 1747 . . 1747 1750 + MboI GATC 1746 1750 . . 1752 1757 + SecI* CCNNGG 1752 1756 . . 1753 1757 + BssKI CCNGG 1752 1757 . . 1753 1757 + BseBI CCWGG 1754 1755 . . 1753 1757 + ScrFI CCNGG 1754 1755 . . 1749 1753 - HphI GGTGA 1741 1740 . . 1753 1757 + EcoRII CCWGG 1752 1757 . . 1756 1760 + FokI GGATG 1769 1773 . . 1756 1760 + BseGI GGATG 1762 1760 . . 1774 1777 + Csp6I GTAC 1774 1776 . . 1774 1777 + RsaI GTAC 1775 1775 . . 1782 1787 + Hpy178III* TCNNGA 1783 1785 . . 1782 1787 + BspHI TCATGA 1782 1786 . . 1783 1786 + FatI CATG 1782 1786 . . 1783 1786 + NlaIII CATG 1786 1782 . . 1783 1786 + CviAII CATG 1783 1785 . . 1812 1822 + BsiYI* CCNNNNNNNGG 1818 1815 . . 1826 1831 + EcoT22I ATGCAT 1830 1826 . . 1827 1830 + CviRI* TGCA 1828 1828 . . 1828 1833 + NspI RCATGY 1832 1828 . . 1829 1832 + FatI CATG 1828 1832 . . 1829 1832 + NlaIII CATG 1832 1828 . . 1829 1832 + CviAII CATG 1829 1831 . . 1832 1836 - BslFI GGGAC 1817 1821 . . 1846 1851 + ApoI RAATTY 1846 1850 . . 1847 1850 + TspEI AATT 1846 1850 . . 1858 1862 + MboII GAAGA 1870 1869 . . 1858 1863 + BbvII* GAAGAC 1865 1869 . . 1861 1865 + HgaI GACGC 1870 1875 . . 1873 1878 + Hpy166II GTNNAC 1875 1875 . . 1873 1878 + SduI GDGCHC 1877 1873 . . 1873 1878 + BseSI GKGCMC 1877 1873 . . 1873 1878 + ApaLI GTGCAC 1873 1877 . . 1873 1878 + HgiAI* GWGCWC 1877 1873 . . 1874 1877 + CviRI* TGCA 1875 1875 . . 1894 1897 + CviRI* TGCA 1895 1895 . . 1895 1899 + BlsI GCNGC 1897 1896 . . 1895 1899 + BisI GCNGC 1896 1897 . . 1895 1899 + BbvI GCAGC 1907 1911 . . 1895 1899 + TseI GCWGC 1895 1898 . . 1896 1901 + NspBII* CMGCKG 1898 1898 . . 1898 1901 - AciI CCGC 1898 1900 . . 1913 1917 + TspDTI ATGAA 1928 1926 . . 1919 1922 + TaiI ACGT 1922 1918 . . 1919 1922 + SetI ASST 1922 1918 . . 1919 1922 + MaeII ACGT 1919 1921 . . 1926 1929 + TspEI AATT 1925 1929 . . 1928 1931 + MseI TTAA 1928 1930 . . 1933 1936 + SetI ASST 1936 1932 . . 1934 1939 + Eco31I GGTCTC 1940 1944 . . 1935 1939 + BsmAI GTCTC 1940 1944 . . 1949 1952 - MnlI CCTC 1942 1941 . . 1952 1956 + MboII GAAGA 1964 1963 . . 1952 1957 + BbvII* GAAGAC 1959 1963 . . 1966 1970 - BccI CCATC 1960 1961 . . 1985 1988 + MaeI CTAG 1985 1987 . . 2005 2010 + SspI AATATT 2007 2007 . . 2009 2012 + MseI TTAA 2009 2011 . . 2016 2020 + BinI* GGATC 2024 2025 . . 2017 2020 + DpnI GATC 2018 2018 . . 2017 2020 + BstKTI GATC 2019 2017 . . 2017 2020 + MboI GATC 2016 2020 . . 2028 2032 + Tsp4CI* ACNGT 2030 2029 . . 2041 2046 + HindIII AAGCTT 2041 2045 . . 2042 2045 + SetI ASST 2045 2041 . . 2042 2045 + CviJI RGCY 2043 2043 . . 2042 2045 + AluI AGCT 2043 2043 . . 2047 2051 + MboII GAAGA 2059 2058 . . 2050 2053 + DpnI GATC 2051 2051 . . 2050 2053 + BstKTI GATC 2052 2050 . . 2050 2053 + MboI GATC 2049 2053 . . 2056 2060 + DdeI CTNAG 2056 2059 . . 2056 2060 + BspCNI CTCAG 2069 2067 . . 2056 2060 + BseMII CTCAG 2070 2068 . . 2057 2061 + Hpy188I TCNGA 2059 2058 . . 2060 2064 + MboII GAAGA 2072 2071 . . 2060 2065 - Ksp632I* CTCTTC 2055 2058 . . 2077 2081 - BccI CCATC 2071 2072 . . 2110 2114 + TspDTI ATGAA 2125 2123 . . 2125 2128 + SetI ASST 2128 2124 . . #--------------------------------------- # # # AccI: # [GTMKAC] # 250 469 1411 # # AciI: # [CCGC] # 226 228 232 565 879 # # AflII: # [CTTAAG] # 457 647 1026 # # AhaIII*: # [TTTAAA] # 982 1148 # # AluI: # [AGCT] # 87 289 356 635 763 # # ApaLI: # [GTGCAC] # 257 1873 # # ApoI: # [RAATTY] # 41 48 284 860 897 # # AsuI*: # [GGNCC] # 31 189 232 242 426 1010 # # AvaI: # [CYCGRG] # 514 1616 # # AvaII: # [GGWCC] # 189 232 273 426 1010 # # BbvI: # [GCAGC] # 223 608 1299 # # BbvII*: # [GAAGAC] # 94 171 1865 # # BccI: # [CCATC] # 59 111 563 649 748 # # BciVI: # [GTATCC] # 900 1230 # # BclI: # [TGATCA] # 384 1746 # # BfiI: # [ACTGGG] # 785 1345 # # BglII: # [AGATCT] # 192 428 686 824 # # BinI*: # [GGATC] # 106 2024 # # BisI: # [GCNGC] # 20 234 563 1313 # # BlsI: # [GCNGC] # 20 233 563 1314 # # BmeT110I: # [CYCGRG] # 515 1615 # # BmgT120I: # [GGNCC] # 31 189 233 242 426 1009 # # BsaXI: # [ACNNNNNCTCC] # 30 642 1458 # # BseBI: # [CCWGG] # 25 66 90 231 376 480 # 862 # # BseGI: # [GGATG] # 90 368 720 952 # # BseMII: # [CTCAG] # 60 948 1122 # # BseRI: # [GAGGAG] # 625 1505 # # BseSI: # [GKGCMC] # 253 1877 # # BseYI: # [CCCAGC] # 228 1902 # # BsiYI*: # [CCNNNNNNNGG] # 228 296 312 1294 # # BslFI: # [GGGAC] # 245 267 313 1305 # # BsmAI: # [GTCTC] # 190 1940 # # BsmI: # [GAATGC] # 831 1299 # # Bsp1407I: # [TGTACA] # 461 1669 # # BspCNI: # [CTCAG] # 61 947 1122 # # BspHI: # [TCATGA] # 348 1782 # # BsrI: # [ACTGG] # 452 780 898 # # BssKI: # [CCNGG] # 25 66 90 231 378 480 # 860 # # BssNAI: # [GTATAC] # 720 1410 # # BstEII: # [GGTNACC] # 779 1351 # # BstKTI: # [GATC] # 18 26 33 78 192 270 # 370 454 689 # # BtsI: # [GCAGTG] # 99 536 1495 # # Cac8I: # [GCNNGC] # 4 264 525 553 784 # # CfrI: # [YGGCCR] # 398 1732 # # ClaI: # [ATCGAT] # 517 1613 # # Csp6I: # [GTAC] # 29 37 104 110 170 356 # 551 773 # # CviAII: # [CATG] # 46 301 450 1333 # # CviJI: # [RGCY] # 8 44 52 60 70 74 # 77 87 94 100 100 189 # 260 294 309 312 # # CviRI*: # [TGCA] # 20 47 112 235 237 470 # 478 531 # # DdeI: # [CTNAG] # 74 292 315 327 1122 # # DpnI: # [GATC] # 18 26 33 79 192 270 # 370 454 688 # # DraII: # [RGGNCCY] # 1010 1120 # # DsaI*: # [CCRYGG] # 449 1681 # # EciI: # [GGCGGA] # 469 1661 # # Eco31I: # [GGTCTC] # 190 1940 # # Eco57I: # [CTGAAG] # 683 1447 # # Eco57MI: # [CTGRAG] # 532 683 915 # # EcoRII: # [CCWGG] # 25 66 90 231 378 480 # 860 # # EcoT22I: # [ATGCAT] # 300 531 1299 # # FalI: # [AAGNNNNNCTT] # 0 0 32 890 1208 # # FatI: # [CATG] # 46 302 449 1333 # # FnuDII*: # [CGCG] # 551 1579 # # FokI: # [GGATG] # 90 361 727 952 # # GlaI: # [GCGC] # 550 1580 # # GsaI: # [CCCAGC] # 232 1898 # # GsuI: # [CTGGAG] # 915 1215 # # HaeIII: # [GGCC] # 396 643 1091 # # HgaI: # [GACGC] # 260 1870 # # HgiAI*: # [GWGCWC] # 253 567 1310 # # HhaI: # [GCGC] # 551 1579 # # Hin4I: # [GAYNNNNNVTC] # 0 0 0 0 0 0 # 32 32 32 32 120 235 # 255 503 889 # # Hin4II*: # [CCTTC] # 2 17 54 62 73 74 # 104 110 120 122 161 221 # 448 562 # # Hin6I: # [GCGC] # 549 1581 # # HindII: # [GTYRAC] # 470 1660 # # HindIII: # [AAGCTT] # 89 2041 # # HinfI: # [GANTC] # 32 339 547 1212 # # HphI: # [GGTGA] # 45 117 190 389 538 851 # # Hpy166II: # [GTNNAC] # 53 59 191 255 470 1102 # # Hpy178III*: # [TCNNGA] # 19 53 100 297 326 329 # 347 659 # # Hpy188I: # [TCNGA] # 33 48 71 238 243 357 # 375 378 387 # # Ksp632I*: # [CTCTTC] # 75 2055 # # MaeI: # [CTAG] # 45 50 86 145 217 435 # 1152 # # MaeII: # [ACGT] # 211 925 994 # # MaeIII: # [GTNAC] # 94 191 219 242 252 489 # 643 # # MboI: # [GATC] # 18 26 33 81 192 270 # 370 454 686 # # MboII: # [GAAGA] # 13 58 94 95 132 218 # 243 370 453 454 # # MfeI: # [CAATTG] # 556 1574 # # MlyI: # [GAGTC] # 333 547 1250 # # MmeI: # [TCCRAC] # 1022 1108 # # MnlI: # [CCTC] # 13 19 39 42 43 44 # 52 104 138 170 188 196 # 296 345 441 # # MseI: # [TTAA] # 19 51 63 81 96 101 # 115 121 217 337 393 536 # # MslI: # [CAYNNNNRTG] # 480 1650 # # MwoI: # [GCNNNNNNNGC] # 789 1341 # # NcoI: # [CCATGG] # 449 1681 # # NlaIII: # [CATG] # 46 298 453 1333 # # NlaIV: # [GGNNCC] # 233 1897 # # NmeAIII: # [GCCGAG] # 769 1361 # # NspBII*: # [CMGCKG] # 228 232 1670 # # NspI: # [RCATGY] # 298 1832 # # PfoI: # [TCCNGGA] # 468 802 860 # # PleI: # [GAGTC] # 333 547 1250 # # PpuMI: # [RGGWCCY] # 1010 1120 # # PsiI: # [TTATAA] # 196 1934 # # PsrI: # [GAACNNNNNNTAC] # 32 969 1129 # # PstI: # [CTGCAG] # 821 1309 # # RsaI: # [GTAC] # 29 38 104 110 170 355 # 551 773 # # SalI: # [GTCGAC] # 468 1662 # # ScaI: # [AGTACT] # 811 1319 # # ScrFI: # [CCNGG] # 25 66 90 231 376 480 # 862 # # SduI: # [GDGCHC] # 253 567 1310 # # SecI*: # [CCNNGG] # 64 91 378 449 569 579 # # SetI: # [ASST] # 2 4 14 19 36 36 # 39 53 54 56 58 59 # 83 85 93 95 109 111 # 128 141 143 157 229 326 # # SexAI: # [ACCWGGT] # 1014 1116 # # SfaNI: # [GCATC] # 15 2115 # # SfeI*: # [CTRYAG] # 25 186 631 1288 # # SmlI: # [CTYRAG] # 457 647 1026 # # SspI: # [AATATT] # 123 935 1072 # # StyI: # [CCWWGG] # 449 1681 # # TaiI: # [ACGT] # 208 925 997 # # TaqI: # [TCGA] # 34 103 366 413 517 697 # # TatI: # [WGTACW] # 36 280 461 580 773 # # TauI: # [GCSGC] # 795 1335 # # TfiI: # [GAWTC] # 918 1212 # # TseI: # [GCWGC] # 235 583 1312 # # Tsp45I: # [GTSAC] # 94 242 443 643 708 # # Tsp4CI*: # [ACNGT] # 11 100 128 138 178 388 # 1187 # # TspDTI: # [ATGAA] # 4 5 42 59 61 69 # 197 214 486 492 501 # # TspEI: # [AATT] # 29 32 36 41 43 48 # 79 135 205 229 276 309 # 327 341 # # TspRI: # [CASTGNN] # 99 148 294 308 365 387 # 529 # # TstI: # [CACNNNNNNTCC] # 32 32 550 674 842 # # VspI: # [ATTAAT] # 491 555 1084 # # XhoII: # [RGATCY] # 192 428 686 824 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 2130 # Reported_sequences: 1 # Reported_hitcount: 432 #---------------------------------------