Ontology: Biological Process (GO:0007029)

Definition: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.

Synonyms: endoplasmic reticulum morphology; ER organization and biogenesis; endoplasmic reticulum organization and biogenesis; endoplasmic reticulum organisation; ER organisation

View Ontology: (graph) | (text)

This table lists the methods used to annotate genes either directly to the term endoplasmic reticulum organization (7 genes) or to its variants containing one or more qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.

Annotation Method	GO Term	# Yeast Genes Annotated
Manually curated (download data)	endoplasmic reticulum organization	7
High-throughput	none	none
Computational	none	none

Links to Additional Annotations:

• View annotations in multiple organisms using
• Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.

Annotation details for genes that have been directly annotated to the term endoplasmic reticulum organization or its variants containing one or more qualifiers (NOT, contributes to, or colocalizes with).

endoplasmic reticulum organization      7 genes directly annotated to this term
Locus	Evidence	Annotation Method	Reference	Assigned By
DOP1/YDR141C	IMP: Inferred from Mutant Phenotype Assigned on 2007-01-19	manually curated	Gillingham AK, et al.  (2006) Mon2, a relative of large Arf exchange factors, recruits Dop1 to the Golgi apparatus. J Biol Chem 281(4):2273-80	HGNC
HER1/YOR227W	IGI: Inferred from Genetic Interaction with SGD:HMG2 Assigned on 2008-08-12	manually curated	Federovitch CM, et al.  (2008) Genetic and structural analysis of Hmg2p-induced endoplasmic reticulum remodeling in Saccharomyces cerevisiae. Mol Biol Cell 19(10):4506-20	SGD
HER2/YMR293C	IGI: Inferred from Genetic Interaction with SGD:HMG2 Assigned on 2008-08-12	manually curated	Federovitch CM, et al.  (2008) Genetic and structural analysis of Hmg2p-induced endoplasmic reticulum remodeling in Saccharomyces cerevisiae. Mol Biol Cell 19(10):4506-20	SGD
RTN1/YDR233C	IGI: Inferred from Genetic Interaction with EBI:Q99287 Assigned on 2011-01-26	manually curated	Hu J, et al.  (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61	UniProtKB
SEY1/YOR165W	IGI: Inferred from Genetic Interaction with SGD:RTN1, SGD:YOP1, EBI:Q04947 Assigned on 2009-08-18	manually curated	Hu J, et al.  (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61	UniProtKB
	IGI: Inferred from Genetic Interaction with EBI:Q8WXF7 Assigned on 2012-05-09	manually curated	Anwar K, et al.  (2012) The dynamin-like GTPase Sey1p mediates homotypic ER fusion in S. cerevisiae. J Cell Biol 197(2):209-17	SGD
SWC3/YAL011W	IMP: Inferred from Mutant Phenotype Assigned on 2004-03-29	manually curated	Wright R, et al.  (2003) Parallel analysis of tagged deletion mutants efficiently identifies genes involved in endoplasmic reticulum biogenesis. Yeast 20(10):881-92	SGD
YOP1/YPR028W	IGI: Inferred from Genetic Interaction with SGD:SEY1, SGD:RTN1 Assigned on 2009-08-19	manually curated	Hu J, et al.  (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61	SGD

SGD Home About Blog Site Map Help Terms of Use
© Stanford University, Stanford, CA 94305.