GO term: rRNA processing 
Ontology: Biological Process (GO:0006364)
Definition: Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
Synonyms: 35S primary transcript processing
View Ontology:
(graph) | 
(text)
Definition: Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
Synonyms: 35S primary transcript processing
View Ontology:
(graph) | (text)
This table lists the methods used to annotate genes either directly to the term
rRNA processing (198 genes)
or to its variants containing one or more
qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.
Links to Additional Annotations:
| Annotation Method | GO Term | # Yeast Genes Annotated |
|---|---|---|
| Manually curated (download data) | rRNA processing | 76 |
| High-throughput (download data) | rRNA processing | 2 |
| Computational (download data) | rRNA processing | 167 |
Links to Additional Annotations:
- View
annotations in multiple organisms using
- Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.
Annotation details for genes that have been directly annotated to the term
rRNA processing or its variants containing one or more
qualifiers (NOT, contributes to, or colocalizes with).
| rRNA processing 198 genes directly annotated to this term |
||||
|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| BFR2/YDR299W | IMP: Inferred from Mutant Phenotype Assigned on 2007-09-19 |
manually curated | Bernstein KA, et al. (2004) The small-subunit processome is a ribosome assembly intermediate. Eukaryot Cell 3(6):1619-26 |
SGD |
| BMS1/YPL217C | IDA: Inferred from Direct Assay Assigned on 2002-06-03 |
manually curated | Gelperin D, et al. (2001) Bms1p, a novel GTP-binding protein, and the related Tsr1p are required for distinct steps of 40S ribosome biogenesis in yeast. RNA 7(9):1268-83 |
SGD |
| BUD21/YOR078W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CBF5/YLR175W | IMP: Inferred from Mutant Phenotype Assigned on 2006-09-20 |
manually curated | Lafontaine DLJ, et al. (1998) The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase. Genes Dev 12(4):527-37 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| CBT1/YKL208W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CGR1/YGL029W | IDA: Inferred from Direct Assay Assigned on 2002-08-28 |
manually curated | Moy TI, et al. (2002) Identification of a role for Saccharomyces cerevisiae Cgr1p in pre-rRNA processing and 60S ribosome subunit synthesis. Microbiology 148(Pt 4):1081-90 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| CSL4/YNL232W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DBP10/YDL031W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DBP2/YNL112W | IMP: Inferred from Mutant Phenotype Assigned on 2006-11-27 |
manually curated | Bond AT, et al. (2001) Absence of Dbp2p alters both nonsense-mediated mRNA decay and rRNA processing. Mol Cell Biol 21(21):7366-79 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| DBP3/YGL078C | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DBP6/YNR038W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DBP7/YKR024C | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DBP8/YHR169W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DBP9/YLR276C | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DHR2/YKL078W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DIM1/YPL266W | TAS: Traceable Author Statement Assigned on 2001-01-18 |
manually curated | Venema J and Tollervey D (1999) Ribosome synthesis in Saccharomyces cerevisiae. Annu Rev Genet 33:261-311 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR011530, EBI:IPR025814 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| DIP2/YLR129W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DIS3/YOL021C | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DRS1/YLL008W | IMP: Inferred from Mutant Phenotype Assigned on 2013-05-01 |
manually curated | Ripmaster TL, et al. (1992) A putative ATP-dependent RNA helicase involved in Saccharomyces cerevisiae ribosome assembly. Proc Natl Acad Sci U S A 89(23):11131-5 |
SGD |
| EBP2/YKL172W | IMP: Inferred from Mutant Phenotype Assigned on 2001-01-18 |
manually curated | Huber MD, et al. (2000) The budding yeast homolog of the human EBNA1-binding protein 2 (Ebp2p) is an essential nucleolar protein required for pre-rRNA processing. J Biol Chem 275(37):28764-73 |
SGD |
| ECM16/YMR128W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| EFG1/YGR271C-A | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| EMG1/YLR186W | IMP: Inferred from Mutant Phenotype Assigned on 2005-05-18 |
manually curated | Liu PC and Thiele DJ (2001) Novel stress-responsive genes EMG1 and NOP14 encode conserved, interacting proteins required for 40S ribosome biogenesis. Mol Biol Cell 12(11):3644-57 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| ENP1/YBR247C | IMP: Inferred from Mutant Phenotype, IPI: Inferred from Physical Interaction with SGD:NOP1 Assigned on 2003-01-30 |
manually curated | Chen W, et al. (2003) Enp1, a yeast protein associated with U3 and U14 snoRNAs, is required for pre-rRNA processing and 40S subunit synthesis. Nucleic Acids Res 31(2):690-9 |
SGD |
| ENP2/YGR145W | IPI: Inferred from Physical Interaction with SGD:UTP9 Assigned on 2003-12-31 |
high-throughput | Hazbun TR, et al. (2003) Assigning function to yeast proteins by integration of technologies. Mol Cell 12(6):1353-65 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| ERB1/YMR049C | IMP: Inferred from Mutant Phenotype Assigned on 2002-12-09 |
manually curated | Pestov DG, et al. (2001) ERB1, the yeast homolog of mammalian Bop1, is an essential gene required for maturation of the 25S and 5.8S ribosomal RNAs. Nucleic Acids Res 29(17):3621-30 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR012953 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| ESF1/YDR365C | IMP: Inferred from Mutant Phenotype, IPI: Inferred from Physical Interaction Assigned on 2004-05-25 |
manually curated | Peng WT, et al. (2004) ESF1 is required for 18S rRNA synthesis in Saccharomyces cerevisiae. Nucleic Acids Res 32(6):1993-9 |
SGD |
| IPI: Inferred from Physical Interaction Assigned on 2003-12-31 |
high-throughput | Hazbun TR, et al. (2003) Assigning function to yeast proteins by integration of technologies. Mol Cell 12(6):1353-65 |
SGD | |
| IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| ESF2/YNR054C | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| FAL1/YDR021W | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| FAP7/YDL166C | IEA: Inferred from Electronic Annotation with EBI:KW-0698 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
