GO term: nucleobase-containing compound metabolic process 
Ontology: Biological Process (GO:0006139)
Definition: Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Synonyms: nucleobase, nucleoside, nucleotide and nucleic acid metabolism; cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolism; cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; nucleobase, nucleoside and nucleotide metabolic process
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(text)
Definition: Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Synonyms: nucleobase, nucleoside, nucleotide and nucleic acid metabolism; cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolism; cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; nucleobase, nucleoside and nucleotide metabolic process
View Ontology:
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This table lists the methods used to annotate genes either directly to the term
nucleobase-containing compound metabolic process (22 genes)
or to its variants containing one or more
qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.
Links to Additional Annotations:
| Annotation Method | GO Term | # Yeast Genes Annotated |
|---|---|---|
| Manually curated (download data) | nucleobase-containing compound metabolic process | 7 |
| High-throughput | none | none |
| Computational (download data) | nucleobase-containing compound metabolic process | 16 |
Links to Additional Annotations:
- View
annotations in multiple organisms using
- Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.
Annotation details for genes that have been directly annotated to the term
nucleobase-containing compound metabolic process or its variants containing one or more
qualifiers (NOT, contributes to, or colocalizes with).
| nucleobase-containing compound metabolic process 22 genes directly annotated to this term |
||||
|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| ADK1/YDR226W | IEA: Inferred from Electronic Annotation with EBI:IPR000850 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| ADK2/YER170W | IEA: Inferred from Electronic Annotation with EBI:IPR000850 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| CHL1/YPL008W | IEA: Inferred from Electronic Annotation with EBI:IPR006555 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| IME4/YGL192W | IEA: Inferred from Electronic Annotation with EBI:IPR007757 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| KAR4/YCL055W | IEA: Inferred from Electronic Annotation with EBI:IPR007757 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| MEC1/YBR136W | IGI: Inferred from Genetic Interaction Assigned on 2001-11-01 |
manually curated | Desany BA, et al. (1998) Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway. Genes Dev 12(18):2956-70 |
SGD |
| MIS1/YBR084W | IMP: Inferred from Mutant Phenotype Assigned on 2002-12-05 |
manually curated | Li Y, et al. (2000) Initiation of protein synthesis in Saccharomyces cerevisiae mitochondria without formylation of the initiator tRNA. J Bacteriol 182(10):2886-92 |
SGD |
| PNP1/YLR209C | IEA: Inferred from Electronic Annotation with EBI:IPR011268 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| POL1/YNL102W | IEA: Inferred from Electronic Annotation with EBI:IPR017964, EBI:IPR006172 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| POL2/YNL262W | IEA: Inferred from Electronic Annotation with EBI:IPR006172 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| POL3/YDL102W | IEA: Inferred from Electronic Annotation with EBI:IPR017964, EBI:IPR006172 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| POL5/YEL055C | IEA: Inferred from Electronic Annotation with EBI:IPR017964 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| RAD3/YER171W | IEA: Inferred from Electronic Annotation with EBI:IPR006555 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| RAD53/YPL153C | IGI: Inferred from Genetic Interaction Assigned on 2001-11-01 |
manually curated | Desany BA, et al. (1998) Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway. Genes Dev 12(18):2956-70 |
SGD |
| RAT1/YOR048C | IEA: Inferred from Electronic Annotation with EBI:IPR017151 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| REV3/YPL167C | IEA: Inferred from Electronic Annotation with EBI:IPR017964, EBI:IPR006172 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| RRP6/YOR001W | IEA: Inferred from Electronic Annotation with EBI:IPR002562 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| SPT6/YGR116W | IEA: Inferred from Electronic Annotation with EBI:IPR006641 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| SRL1/YOR247W | IGI: Inferred from Genetic Interaction Assigned on 2001-11-01 |
manually curated | Desany BA, et al. (1998) Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway. Genes Dev 12(18):2956-70 |
SGD |
| SRL2/YLR082C | IGI: Inferred from Genetic Interaction Assigned on 2001-11-01 |
manually curated | Desany BA, et al. (1998) Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway. Genes Dev 12(18):2956-70 |
SGD |
| SRL3/YKR091W | IGI: Inferred from Genetic Interaction Assigned on 2001-11-01 |
manually curated | Desany BA, et al. (1998) Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway. Genes Dev 12(18):2956-70 |
SGD |
| URA6/YKL024C | IDA: Inferred from Direct Assay Assigned on 2001-01-18 |
manually curated | Choi WJ, et al. (1989) The Saccharomyces cerevisiae SOC8-1 gene and its relationship to a nucleotide kinase. J Biol Chem 264(26):15593-9 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR000850 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
