GO term: cellular bud neck 
Ontology: Cellular Component (GO:0005935)
Definition: The constriction between the mother cell and daughter cell (bud) in an organism that reproduces by budding.
View Ontology:
(graph) | 
(text)
Definition: The constriction between the mother cell and daughter cell (bud) in an organism that reproduces by budding.
View Ontology:
(graph) | (text)
This table lists the methods used to annotate genes either directly to the term
cellular bud neck (153 genes)
or to its variants containing one or more
qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.
Links to Additional Annotations:
| Annotation Method | GO Term | # Yeast Genes Annotated |
|---|---|---|
| Manually curated (download data) | cellular bud neck | 115 |
| High-throughput (download data) | cellular bud neck | 40 |
| Computational (download data) | cellular bud neck | 60 |
Links to Additional Annotations:
- View
annotations in multiple organisms using
- Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.
Annotation details for genes that have been directly annotated to the term
cellular bud neck or its variants containing one or more
qualifiers (NOT, contributes to, or colocalizes with).
| cellular bud neck 153 genes directly annotated to this term |
||||
|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| AFI1/YOR129C | IDA: Inferred from Direct Assay Assigned on 2008-04-15 |
manually curated | Tsai PC, et al. (2008) Afi1p Functions as an Arf3p Polarization-specific Docking Factor for Development of Polarity. J Biol Chem 283(24):16915-27 |
SGD |
| AIM44/YPL158C | IDA: Inferred from Direct Assay Assigned on 2013-04-24 |
manually curated | Meitinger F, et al. (2013) A safeguard mechanism regulates Rho GTPases to coordinate cytokinesis with the establishment of cell polarity. PLoS Biol 11(2):e1001495 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 |
SGD | |
| IDA: Inferred from Direct Assay Assigned on 2013-01-20 |
high-throughput | Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 |
SGD | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| AKL1/YBR059C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 |
SGD |
| APL3/YBL037W | IDA: Inferred from Direct Assay Assigned on 2012-10-21 |
manually curated | Zou J, et al. (2009) Regulation of cell polarity through phosphorylation of Bni4 by Pho85 G1 cyclin-dependent kinases in Saccharomyces cerevisiae. Mol Biol Cell 20(14):3239-50 |
SGD |
| ARF3/YOR094W | IDA: Inferred from Direct Assay Assigned on 2007-09-11 |
manually curated | Gillingham AK and Munro S (2007) Identification of a guanine nucleotide exchange factor for Arf3, the yeast orthologue of mammalian Arf6. PLoS ONE 2(9):e842 |
SGD |
| AXL1/YPR122W | IDA: Inferred from Direct Assay Assigned on 2003-01-09 |
manually curated | Lord M, et al. (2002) Subcellular localization of Axl1, the cell type-specific regulator of polarity. Curr Biol 12(15):1347-52 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| AXL2/YIL140W | IDA: Inferred from Direct Assay Assigned on 2004-10-08 |
manually curated | Sundin BA, et al. (2004) Localization of proteins that are coordinately expressed with Cln2 during the cell cycle. Yeast 21(9):793-800 |
SGD |
| BEM1/YBR200W | IDA: Inferred from Direct Assay Assigned on 2002-08-07 |
manually curated | Butty AC, et al. (2002) A positive feedback loop stabilizes the guanine-nucleotide exchange factor Cdc24 at sites of polarization. EMBO J 21(7):1565-76 |
SGD |
| BIL1/YOR304C-A | IDA: Inferred from Direct Assay Assigned on 2013-05-22 |
manually curated | Graziano BR, et al. (2013) Ligand-induced activation of a formin-NPF pair leads to collaborative actin nucleation. J Cell Biol 201(4):595-611 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 |
SGD | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| BNI1/YNL271C | IDA: Inferred from Direct Assay Assigned on 2003-08-27 |
manually curated | Ozaki-Kuroda K, et al. (2001) Dynamic localization and function of Bni1p at the sites of directed growth in Saccharomyces cerevisiae. Mol Cell Biol 21(3):827-39 |
SGD |
| BNI4/YNL233W | IDA: Inferred from Direct Assay Assigned on 2004-10-08 |
manually curated | Sundin BA, et al. (2004) Localization of proteins that are coordinately expressed with Cln2 during the cell cycle. Yeast 21(9):793-800 |
SGD |
| BNI5/YNL166C | IDA: Inferred from Direct Assay Assigned on 2002-09-26 |
manually curated | Lee PR, et al. (2002) Bni5p, a septin-interacting protein, is required for normal septin function and cytokinesis in Saccharomyces cerevisiae. Mol Cell Biol 22(19):6906-20 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2012-12-12 |
high-throughput | Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 |
SGD | |
| BNR1/YIL159W | IDA: Inferred from Direct Assay Assigned on 2010-04-05 |
manually curated | Kamei T, et al. (1998) Interaction of Bnr1p with a novel Src homology 3 domain-containing Hof1p. Implication in cytokinesis in Saccharomyces cerevisiae. J Biol Chem 273(43):28341-5 |
SGD |
| BOI1/YBL085W | IDA: Inferred from Direct Assay Assigned on 2002-08-21 |
manually curated | Hallett MA, et al. (2002) Probing the importance and potential roles of the binding of the PH-domain protein Boi1 to acidic phospholipids. BMC Cell Biol 3():16 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2012-12-12 |
high-throughput | Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 |
SGD | |
| BOI2/YER114C | IDA: Inferred from Direct Assay Assigned on 2002-08-21 |
manually curated | Hallett MA, et al. (2002) Probing the importance and potential roles of the binding of the PH-domain protein Boi1 to acidic phospholipids. BMC Cell Biol 3():16 |
SGD |
| BSP1/YPR171W | IDA: Inferred from Direct Assay Assigned on 2003-04-29 |
manually curated | Wicky S, et al. (2003) Bsp1p/Ypr171p is an adapter that directly links some synaptojanin family members to the cortical actin cytoskeleton in yeast. FEBS Lett 537(1-3):35-41 |
SGD |
| BUD14/YAR014C | IDA: Inferred from Direct Assay Assigned on 2002-10-10 |
manually curated | Ni L and Snyder M (2001) A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell 12(7):2147-70 |
SGD |
| BUD2/YKL092C | IDA: Inferred from Direct Assay Assigned on 2013-03-12 |
manually curated | Park HO, et al. (1999) Localization of Bud2p, a GTPase-activating protein necessary for programming cell polarity in yeast to the presumptive bud site. Genes Dev 13(15):1912-7 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2013-03-12 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 |
SGD | |
| BUD3/YCL014W | IDA: Inferred from Direct Assay Assigned on 2005-06-02 |
manually curated | Bailly E, et al. (2003) Differential cellular localization among mitotic cyclins from Saccharomyces cerevisiae: a new role for the axial budding protein Bud3 in targeting Clb2 to the mother-bud neck. J Cell Sci 116(Pt 20):4119-30 |
SGD |
| BUD4/YJR092W | IDA: Inferred from Direct Assay Assigned on 2012-12-12 |
high-throughput | Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| BUD5/YCR038C | IDA: Inferred from Direct Assay Assigned on 2003-01-08 |
manually curated | Kang PJ, et al. (2001) A GDP/GTP exchange factor involved in linking a spatial landmark to cell polarity. Science 292(5520):1376-8 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| BUD6/YLR319C | IDA: Inferred from Direct Assay Assigned on 2012-11-14 |
manually curated | Segal M, et al. (2000) Bud6 directs sequential microtubule interactions with the bud tip and bud neck during spindle morphogenesis in Saccharomyces cerevisiae. Mol Biol Cell 11(11):3689-702 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2012-11-14 |
manually curated | Amberg DC, et al. (1997) Aip3p/Bud6p, a yeast actin-interacting protein that is involved in morphogenesis and the selection of bipolar budding sites. Mol Biol Cell 8(4):729-53 |
SGD | |
| IDA: Inferred from Direct Assay Assigned on 2013-05-22 |
manually curated | Graziano BR, et al. (2013) Ligand-induced activation of a formin-NPF pair leads to collaborative actin nucleation. J Cell Biol 201(4):595-611 |
SGD | |
| BUD9/YGR041W | IDA: Inferred from Direct Assay Assigned on 2002-12-01 |
manually curated | Harkins HA, et al. (2001) Bud8p and Bud9p, proteins that may mark the sites for bipolar budding in yeast. Mol Biol Cell 12(8):2497-518 |
SGD |
| CAF120/YNL278W | IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CAP1/YKL007W | IDA: Inferred from Direct Assay Assigned on 2012-12-12 |
high-throughput | Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 |
SGD |
| CBK1/YNL161W | IDA: Inferred from Direct Assay Assigned on 2010-01-05 |
manually curated | Racki WJ, et al. (2000) Cbk1p, a protein similar to the human myotonic dystrophy kinase, is essential for normal morphogenesis in Saccharomyces cerevisiae. EMBO J 19(17):4524-32 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2010-01-05 |
manually curated | Bidlingmaier S, et al. (2001) The Cbk1p pathway is important for polarized cell growth and cell separation in Saccharomyces cerevisiae. Mol Cell Biol 21(7):2449-62 |
SGD | |
| IDA: Inferred from Direct Assay Assigned on 2009-12-11 |
manually curated | Colman-Lerner A, et al. (2001) Yeast Cbk1 and Mob2 activate daughter-specific genetic programs to induce asymmetric cell fates. Cell 107(6):739-50 |
SGD | |
| IDA: Inferred from Direct Assay Assigned on 2002-09-30 |
manually curated | Weiss EL, et al. (2002) The Saccharomyces cerevisiae Mob2p-Cbk1p kinase complex promotes polarized growth and acts with the mitotic exit network to facilitate daughter cell-specific localization of Ace2p transcription factor. J Cell Biol 158(5):885-900 |
SGD | |
| IDA: Inferred from Direct Assay Assigned on 2012-12-12 |
high-throughput | Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 |
SGD | |
| CDC10/YCR002C | IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CDC11/YJR076C | IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CDC12/YHR107C | IEA: Inferred from Electronic Annotation with EBI:SL-0029 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CDC15/YAR019C | IDA: Inferred from Direct Assay Assigned on 2013-01-17 |
manually curated | Bardin AJ, et al. (2003) Mitotic exit regulation through distinct domains within the protein kinase Cdc15. Mol Cell Biol 23(14):5018-30 |
SGD |
