Definition: All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
| Annotation Method | GO Term | # Yeast Genes Annotated |
|---|---|---|
| Manually curated (download data) | cytoplasm | 398 |
| NOT: cytoplasm | 1 | |
| High-throughput (download data) | cytoplasm | 999 |
| Computational (download data) | cytoplasm | 1432 |
Links to Additional Annotations:
| NOT: cytoplasm 1 gene directly annotated to this term |
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|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| ESF2/YNR054C | IDA: Inferred from Direct Assay Assigned on 2005-08-15 |
manually curated | Hoang T, et al. (2005) Esf2p, a U3-associated factor required for small-subunit processome assembly and compaction. Mol Cell Biol 25(13):5523-34 | SGD |
| cytoplasm 2052 genes directly annotated to this term |
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|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| AAH1/YNL141W | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| AAP1/YHR047C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| AAR2/YBL074C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| AAT2/YLR027C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ABP1/YCR088W | IDA: Inferred from Direct Assay Assigned on 2002-05-07 |
high-throughput | Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19 | SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| ABP140/YOR239W | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ABZ1/YNR033W | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ABZ2/YMR289W | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ACB1/YGR037C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| ACC1/YNR016C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ACF2/YLR144C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ACH1/YBL015W | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ACM1/YPL267W | IDA: Inferred from Direct Assay Assigned on 2008-08-22 |
manually curated | Enquist-Newman M, et al. (2008) Modulation of the Mitotic Regulatory Network by APC-Dependent Destruction of the Cdh1 Inhibitor Acm1. Mol Cell 30(4):437-46 | SGD |
| ACO1/YLR304C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ACS1/YAL054C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ACS2/YLR153C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ACT1/YFL039C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| ADD37/YMR184W | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ADD66/YKL206C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ADE1/YAR015W | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| ADE12/YNL220W | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| ADE2/YOR128C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| ADE3/YGR204W | IDA: Inferred from Direct Assay Assigned on 2002-05-07 |
high-throughput | Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19 | SGD |
| IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD | |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ADE4/YMR300C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| ADE5,7/YGL234W | IDA: Inferred from Direct Assay Assigned on 2002-05-07 |
high-throughput | Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19 | SGD |
| IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD | |
| IEA: Inferred from Electronic Annotation with EBI:IPR004733 Last Updated 2009-10-01 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. | UniProtKB | |
| ADE6/YGR061C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ADE8/YDR408C | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
| ADH1/YOL086C | IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ADH2/YMR303C | IDA: Inferred from Direct Assay Assigned on 2002-05-07 |
high-throughput | Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19 | SGD |
| IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD | |
| IEA: Inferred from Electronic Annotation with EBI:KW-0963 Last Updated 2009-10-01 |
computational | GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping. | UniProtKB | |
| IEA: Inferred from Electronic Annotation with EBI:SL-0086 Last Updated 2009-10-01 |
computational | GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping. | UniProtKB | |
| ADH5/YBR145W | IDA: Inferred from Direct Assay Assigned on 2003-10-28 |
high-throughput | Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 | SGD |
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