GO term: extracellular region 
Ontology: Cellular Component (GO:0005576)
Definition: The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
Synonyms: extracellular
View Ontology:
(graph) | 
(text)
Definition: The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
Synonyms: extracellular
View Ontology:
(graph) | (text)
This table lists the methods used to annotate genes either directly to the term
extracellular region (102 genes)
or to its variants containing one or more
qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.
Links to Additional Annotations:
| Annotation Method | GO Term | # Yeast Genes Annotated |
|---|---|---|
| Manually curated (download data) | extracellular region | 34 |
| High-throughput | none | none |
| Computational (download data) | extracellular region | 87 |
Links to Additional Annotations:
- View
annotations in multiple organisms using
- Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.
Annotation details for genes that have been directly annotated to the term
extracellular region or its variants containing one or more
qualifiers (NOT, contributes to, or colocalizes with).
| extracellular region 102 genes directly annotated to this term |
||||
|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| FLO10/YKR102W | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| FLO11/YIR019C | IDA: Inferred from Direct Assay Assigned on 2011-02-14 |
manually curated | Karunanithi S, et al. (2010) Shedding of the Mucin-Like Flocculin Flo11p Reveals a New Aspect of Fungal Adhesion Regulation. Curr Biol 20(15):1389-1395 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| FLO5/YHR211W | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| FLO9/YAL063C | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| FYV5/YCL058C | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| GAS1/YMR307W | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| GAS3/YMR215W | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| GAS5/YOL030W | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| HPF1/YOL155C | IDA: Inferred from Direct Assay Assigned on 2004-01-14 |
manually curated | Terashima H, et al. (2002) Sequence-based approach for identification of cell wall proteins in Saccharomyces cerevisiae. Curr Genet 40(5):311-6 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| HSP150/YJL159W | IDA: Inferred from Direct Assay Assigned on 2009-09-15 |
manually curated | Curwin AJ, et al. (2009) Phospholipid Transfer Protein Sec14 Is Required for Trafficking from Endosomes and Regulates Distinct trans-Golgi Export Pathways. J Biol Chem 284(11):7364-75 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| KHR1 | IDA: Inferred from Direct Assay Assigned on 2009-01-19 |
manually curated | Goto K, et al. (1990) Isolation and properties of a chromosome-dependent KHR killer toxin in Saccharomyces cerevisiae. Agric Biol Chem 54(2):505-9 |
SGD |
| KHS1 | IDA: Inferred from Direct Assay Assigned on 2008-04-17 |
manually curated | Goto K, et al. (1991) Cloning and nucleotide sequence of the KHS killer gene of Saccharomyces cerevisiae. Agric Biol Chem 55(8):1953-8 |
SGD |
| KNH1/YDL049C | IDA: Inferred from Direct Assay Assigned on 2002-05-31 |
manually curated | Dijkgraaf GJ, et al. (1996) The KNH1 gene of Saccharomyces cerevisiae is a functional homolog of KRE9. Yeast 12(7):683-92 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR008659 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| KRE1/YNL322C | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| KRE9/YJL174W | IDA: Inferred from Direct Assay Assigned on 2001-01-18 |
manually curated | Brown JL and Bussey H (1993) The yeast KRE9 gene encodes an O glycoprotein involved in cell surface beta-glucan assembly. Mol Cell Biol 13(10):6346-56 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR008659 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| MF(ALPHA)1/YPL187W | TAS: Traceable Author Statement Assigned on 2005-02-16 |
manually curated | Julius D, et al. (1983) Yeast alpha factor is processed from a larger precursor polypeptide: the essential role of a membrane-bound dipeptidyl aminopeptidase. Cell 32(3):839-52 |
SGD |
| TAS: Traceable Author Statement Assigned on 2001-01-18 |
manually curated | Kurjan J and Herskowitz I (1982) Structure of a yeast pheromone gene (MF alpha): a putative alpha-factor precursor contains four tandem copies of mature alpha-factor. Cell 30(3):933-43 |
SGD | |
| IEA: Inferred from Electronic Annotation with EBI:IPR006742, EBI:IPR008675, EBI:IPR016326 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| MF(ALPHA)2/YGL089C | TAS: Traceable Author Statement Assigned on 2005-02-16 |
manually curated | Julius D, et al. (1983) Yeast alpha factor is processed from a larger precursor polypeptide: the essential role of a membrane-bound dipeptidyl aminopeptidase. Cell 32(3):839-52 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR006742, EBI:IPR008675, EBI:IPR016326 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| MFA1/YDR461W | IDA: Inferred from Direct Assay Assigned on 2001-01-18 |
manually curated | Quinby GE, et al. (1999) Expression of MFA1 and STE6 is sufficient for mating type-independent secretion of yeast a-factor, but not mating competence. Curr Genet 35(1):1-7 |
SGD |
| MFA2/YNL145W | IDA: Inferred from Direct Assay Assigned on 2002-10-23 |
manually curated | Marcus S, et al. (1991) Significance of C-terminal cysteine modifications to the biological activity of the Saccharomyces cerevisiae a-factor mating pheromone. Mol Cell Biol 11(7):3603-12 |
SGD |
| PAU23/YLR037C | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| PAU24/YBR301W | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| PGU1/YJR153W | IDA: Inferred from Direct Assay Assigned on 2002-11-18 |
manually curated | Gognies S, et al. (1999) Cloning, sequence analysis and overexpression of a Saccharomyces cerevisiae endopolygalacturonase-encoding gene (PGL1). Yeast 15(1):11-22 |
SGD |
| IDA: Inferred from Direct Assay Assigned on 2004-01-14 |
manually curated | Terashima H, et al. (2002) Sequence-based approach for identification of cell wall proteins in Saccharomyces cerevisiae. Curr Genet 40(5):311-6 |
SGD | |
| PHO11/YAR071W | IDA: Inferred from Direct Assay Assigned on 2001-01-18 |
manually curated | Shnyreva MG, et al. (1996) Biochemical properties and excretion behavior of repressible acid phosphatases with altered subunit composition. Microbiol Res 151(3):291-300 |
SGD |
| PHO5/YBR093C | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| IEA: Inferred from Electronic Annotation with EBI:SL-0243 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| PIR1/YKL164C | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| PIR3/YKL163W | IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| PLB2/YMR006C | IDA: Inferred from Direct Assay Assigned on 2003-09-21 |
manually curated | Merkel O, et al. (1999) Characterization and function in vivo of two novel phospholipases B/lysophospholipases from Saccharomyces cerevisiae. J Biol Chem 274(40):28121-7 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0964 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| PLB3/YOL011W | IDA: Inferred from Direct Assay Assigned on 2003-09-21 |
manually curated | Merkel O, et al. (1999) Characterization and function in vivo of two novel phospholipases B/lysophospholipases from Saccharomyces cerevisiae. J Biol Chem 274(40):28121-7 |
SGD |
| PRY1/YJL079C | IDA: Inferred from Direct Assay Assigned on 2004-01-14 |
manually curated | Terashima H, et al. (2002) Sequence-based approach for identification of cell wall proteins in Saccharomyces cerevisiae. Curr Genet 40(5):311-6 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR018244 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| PRY2/YKR013W | IDA: Inferred from Direct Assay Assigned on 2004-01-14 |
manually curated | Terashima H, et al. (2002) Sequence-based approach for identification of cell wall proteins in Saccharomyces cerevisiae. Curr Genet 40(5):311-6 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR018244 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
