GO term: calcium ion binding

Ontology: Molecular Function (GO:0005509)

Definition: Interacting selectively and non-covalently with calcium ions (Ca2+).

Synonyms: calcium ion storage activity

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Annotation Summary

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This table lists the methods used to annotate genes either directly to the term calcium ion binding (28 genes) or to its variants containing one or more qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.

Annotation Method	GO Term	# Yeast Genes Annotated
Manually curated (download data)	calcium ion binding	8
High-throughput	none	none
Computational (download data)	calcium ion binding	26

Links to Additional Annotations:

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Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.

Genes Annotated with this Term

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Annotation details for genes that have been directly annotated to the term calcium ion binding or its variants containing one or more qualifiers (NOT, contributes to, or colocalizes with).

calcium ion binding 28 genes directly annotated to this term
Locus	Evidence	Annotation Method	Reference	Assigned By
AXL2/YIL140W	IEA: Inferred from Electronic Annotation with EBI:IPR006644, EBI:IPR015919 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CAM1/YPL048W	IDA: Inferred from Direct Assay Assigned on 2007-08-24	manually curated	Kambouris NG, et al. (1993) Cloning and genetic characterization of a calcium- and phospholipid-binding protein from Saccharomyces cerevisiae that is homologous to translation elongation factor-1 gamma. Yeast 9(2):151-63	SGD
CCH1/YGR217W	IEA: Inferred from Electronic Annotation with EBI:IPR002048 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CDC31/YOR257W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CMD1/YBR109C	IDA: Inferred from Direct Assay Assigned on 2005-05-03	manually curated	Starovasnik MA, et al. (1993) Similarities and differences between yeast and vertebrate calmodulin: an examination of the calcium-binding and structural properties of calmodulin from the yeast Saccharomyces cerevisiae. Biochemistry 32(13):3261-70	SGD
	IDA: Inferred from Direct Assay Assigned on 2007-07-18	manually curated	Davis TN, et al. (1986) Isolation of the yeast calmodulin gene: calmodulin is an essential protein. Cell 47(3):423-31	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CNB1/YKL190W	ISS: Inferred from Sequence or structural Similarity Assigned on 2005-05-05	manually curated	Rusnak F and Mertz P (2000) Calcineurin: form and function. Physiol Rev 80(4):1483-521	SGD
CNB1/YKL190W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CNE1/YAL058W	IEA: Inferred from Electronic Annotation with EBI:IPR009033, EBI:IPR018124, EBI:IPR001580 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
EDE1/YBL047C	IEA: Inferred from Electronic Annotation with EBI:IPR011992, EBI:IPR002048 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
END3/YNL084C	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
FRQ1/YDR373W	ISS: Inferred from Sequence or structural Similarity Assigned on 2001-01-18	manually curated	Hendricks KB, et al. (1999) Yeast homologue of neuronal frequenin is a regulator of phosphatidylinositol-4-OH kinase. Nat Cell Biol 1(4):234-41	SGD
FRQ1/YDR373W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992, EBI:IPR001125 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
GEM1/YAL048C	IDA: Inferred from Direct Assay Assigned on 2010-11-15	manually curated	Koshiba T, et al. (2011) Structure-Function Analysis of the Yeast Mitochondrial Rho GTPase, Gem1p: IMPLICATIONS FOR MITOCHONDRIAL INHERITANCE. J Biol Chem 286(1):354-62	SGD
GEM1/YAL048C	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR021181 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
IRS4/YKR019C	IEA: Inferred from Electronic Annotation with EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
MDR1/YGR100W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
MLC1/YGL106W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
MLC2/YPR188C	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
MNL1/YHR204W	IEA: Inferred from Electronic Annotation with EBI:IPR001382 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
MNL2/YLR057W	IEA: Inferred from Electronic Annotation with EBI:IPR001382 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
MNS1/YJR131W	IEA: Inferred from Electronic Annotation with EBI:IPR001382 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
NTH1/YDR001C	IEA: Inferred from Electronic Annotation with EBI:IPR011120 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
NTH2/YBR001C	IEA: Inferred from Electronic Annotation with EBI:IPR011120 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
PAN1/YIR006C	IEA: Inferred from Electronic Annotation with EBI:IPR011992, EBI:IPR002048 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
PEF1/YGR058W	IDA: Inferred from Direct Assay Assigned on 2007-07-26	manually curated	Vernarecci S, et al. (2007) The yeast penta-EF protein Pef1p is involved in cation-dependent budding and cell polarization. Mol Microbiol 65(4):1122-38	SGD
PEF1/YGR058W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
PLC1/YPL268W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
PMR1/YGL167C	IDA: Inferred from Direct Assay Assigned on 2006-10-23	manually curated	Wei Y, et al. (1999) An N-terminal EF hand-like motif modulates ion transport by Pmr1, the yeast Golgi Ca(2+)/Mn(2+)-ATPase. Biochemistry 38(44):14534-41	SGD
SAC6/YDR129C	IEA: Inferred from Electronic Annotation with EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
SAL1/YNL083W	IDA: Inferred from Direct Assay Assigned on 2004-07-16	manually curated	Chen XJ (2004) Sal1p, a calcium-dependent carrier protein that suppresses an essential cellular function associated With the Aac2 isoform of ADP/ATP translocase in Saccharomyces cerevisiae. Genetics 167(2):607-17	SGD
SAL1/YNL083W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
SSP120/YLR250W	IEA: Inferred from Electronic Annotation with EBI:IPR002048, EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
TAX4/YJL083W	IEA: Inferred from Electronic Annotation with EBI:IPR011992 Last Updated 2013-03-02	computational	DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro

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