Ontology: Biological Process (GO:0055085)

Definition: The process in which a solute is transported from one side of a membrane to the other.

Synonyms: membrane transport

View Ontology: (graph) | (text)

This table lists the methods used to annotate genes either directly to the term transmembrane transport (217 genes) or to its variants containing one or more qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.

Annotation Method	GO Term	# Yeast Genes Annotated
Manually curated (download data)	transmembrane transport	71
High-throughput	none	none
Computational (download data)	transmembrane transport	188

Links to Additional Annotations:

• View annotations in multiple organisms using
• Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.

Annotation details for genes that have been directly annotated to the term transmembrane transport or its variants containing one or more qualifiers (NOT, contributes to, or colocalizes with).

transmembrane transport      217 genes directly annotated to this term
Locus	Evidence	Annotation Method	Reference	Assigned By
AAC1/YMR056C	IEA: Inferred from Electronic Annotation with EBI:IPR002113, EBI:IPR002067 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
AAC3/YBR085W	ISA: Inferred from Sequence Alignment with SGD:AAC1, SGD:PET9 Assigned on 2008-12-10	manually curated	Kolarov J, et al.  (1990) A third ADP/ATP translocator gene in yeast. J Biol Chem 265(21):12711-6	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR002067, EBI:IPR002113 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
ADP1/YCR011C	ISS: Inferred from Sequence or structural Similarity with SGD:PXA2 Assigned on 2013-03-25	manually curated	Decottignies A and Goffeau A  (1997) Complete inventory of the yeast ABC proteins. Nat Genet 15(2):137-45	SGD
ADY2/YCR010C	IMP: Inferred from Mutant Phenotype Assigned on 2008-12-15	manually curated	Paiva S, et al.  (2004) Ady2p is essential for the acetate permease activity in the yeast Saccharomyces cerevisiae. Yeast 21(3):201-10	SGD
AGC1/YPR021C	IEA: Inferred from Electronic Annotation with EBI:IPR002067 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
AGP1/YCL025C	IDA: Inferred from Direct Assay Assigned on 2008-12-15	manually curated	Regenberg B, et al.  (1999) Substrate specificity and gene expression of the amino-acid permeases in Saccharomyces cerevisiae. Curr Genet 36(6):317-28	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR004841, EBI:IPR004840 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
AGP2/YBR132C	IDA: Inferred from Direct Assay Assigned on 2008-12-10	manually curated	van Roermund CW, et al.  (1999) Molecular characterization of carnitine-dependent transport of acetyl-CoA from peroxisomes to mitochondria in Saccharomyces cerevisiae and identification of a plasma membrane carnitine transporter, Agp2p. EMBO J 18(21):5843-52	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR004841, EBI:IPR004840 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
AGP3/YFL055W	IDA: Inferred from Direct Assay Assigned on 2009-04-16	manually curated	Regenberg B, et al.  (1999) Substrate specificity and gene expression of the amino-acid permeases in Saccharomyces cerevisiae. Curr Genet 36(6):317-28	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR004840, EBI:IPR004841 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
ALP1/YNL270C	IEA: Inferred from Electronic Annotation with EBI:IPR004840, EBI:IPR004841 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
ALR1/YOL130W	IEA: Inferred from Electronic Annotation with EBI:IPR002523 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
ALR2/YFL050C	IMP: Inferred from Mutant Phenotype, ISS: Inferred from Sequence or structural Similarity Assigned on 2009-04-16	manually curated	MacDiarmid CW and Gardner RC  (1998) Overexpression of the Saccharomyces cerevisiae magnesium transport system confers resistance to aluminum ion. J Biol Chem 273(3):1727-32	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR002523 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
AQR1/YNL065W	IEA: Inferred from Electronic Annotation with EBI:IPR005829, EBI:IPR011701 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
ARN2/YHL047C	IEA: Inferred from Electronic Annotation with EBI:IPR011701 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
ATM1/YMR301C	IEA: Inferred from Electronic Annotation with EBI:IPR001140, EBI:IPR011527 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
	IBA: Inferred from Biological Aspect of Ancestor with PANTHER:PTHR24221_AN0 Assigned on 2010-07-28	computational	Gaudet P, et al.  (2011) Annotation inferences using phylogenetic trees.	RefGenome
ATO3/YDR384C	IMP: Inferred from Mutant Phenotype Assigned on 2009-01-14	manually curated	Palkova Z, et al.  (2002) Ammonia pulses and metabolic oscillations guide yeast colony development. Mol Biol Cell 13(11):3901-14	SGD
ATR1/YML116W	IEA: Inferred from Electronic Annotation with EBI:IPR011701 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
ATX2/YOR079C	IEA: Inferred from Electronic Annotation with EBI:IPR003689 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
AVT6/YER119C	IMP: Inferred from Mutant Phenotype Assigned on 2009-04-16	manually curated	Russnak R, et al.  (2001) A family of yeast proteins mediating bidirectional vacuolar amino acid transport. J Biol Chem 276(26):23849-57	SGD
AZR1/YGR224W	IEA: Inferred from Electronic Annotation with EBI:IPR011701 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
BAP2/YBR068C	IDA: Inferred from Direct Assay Assigned on 2008-12-10	manually curated	Regenberg B, et al.  (1999) Substrate specificity and gene expression of the amino-acid permeases in Saccharomyces cerevisiae. Curr Genet 36(6):317-28	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR004841, EBI:IPR004840 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
BAP3/YDR046C	IDA: Inferred from Direct Assay Assigned on 2009-01-14	manually curated	Regenberg B, et al.  (1999) Substrate specificity and gene expression of the amino-acid permeases in Saccharomyces cerevisiae. Curr Genet 36(6):317-28	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR004841, EBI:IPR004840 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
BPT1/YLL015W	IEA: Inferred from Electronic Annotation with EBI:IPR011527, EBI:IPR001140 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
BSC6/YOL137W	IEA: Inferred from Electronic Annotation with EBI:IPR011701 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CAN1/YEL063C	IDA: Inferred from Direct Assay Assigned on 2009-04-16	manually curated	Regenberg B, et al.  (1999) Substrate specificity and gene expression of the amino-acid permeases in Saccharomyces cerevisiae. Curr Genet 36(6):317-28	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR004841, EBI:IPR004840 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CCC2/YDR270W	IMP: Inferred from Mutant Phenotype Assigned on 2009-01-14	manually curated	Yuan DS, et al.  (1995) The Menkes/Wilson disease gene homologue in yeast provides copper to a ceruloplasmin-like oxidase required for iron uptake. Proc Natl Acad Sci U S A 92(7):2632-6	SGD
CCH1/YGR217W	IEA: Inferred from Electronic Annotation with EBI:IPR005821 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
COT1/YOR316C	IEA: Inferred from Electronic Annotation with EBI:IPR002524 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
CTP1/YBR291C	IDA: Inferred from Direct Assay Assigned on 2008-12-12	manually curated	Kaplan RS, et al.  (1995) High level expression and characterization of the mitochondrial citrate transport protein from the yeast Saccharomyces cerevisiae. J Biol Chem 270(8):4108-14	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR002067 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
DAL5/YJR152W	IEA: Inferred from Electronic Annotation with EBI:IPR011701 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
DIP5/YPL265W	IEA: Inferred from Electronic Annotation with EBI:IPR004840, EBI:IPR004841 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro

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