Ontology: Biological Process (GO:0034613)

Definition: Any process in which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.

Synonyms: channel localizer activity; cellular protein localisation

View Ontology: (graph) | (text)

This table lists the methods used to annotate genes either directly to the term cellular protein localization (7 genes) or to its variants containing one or more qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.

Annotation Method	GO Term	# Yeast Genes Annotated
Manually curated (download data)	cellular protein localization	7
High-throughput	none	none
Computational	none	none

Links to Additional Annotations:

• View annotations in multiple organisms using
• Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.

Annotation details for genes that have been directly annotated to the term cellular protein localization or its variants containing one or more qualifiers (NOT, contributes to, or colocalizes with).

cellular protein localization      7 genes directly annotated to this term
Locus	Evidence	Annotation Method	Reference	Assigned By
HAL5/YJL165C	IGI: Inferred from Genetic Interaction with SGD:PPZ1 Assigned on 2011-01-26	manually curated	Hirasaki M, et al.  (2011) Saccharomyces cerevisiae protein phosphatase Ppz1 and protein kinases Sat4 and Hal5 are involved in the control of subcellular localization of Gln3 by likely regulating its phosphorylation state. J Biosci Bioeng 111(3):249-54	SGD
KSP1/YHR082C	IMP: Inferred from Mutant Phenotype Assigned on 2012-05-04	manually curated	Bharucha N, et al.  (2008) Analysis of the Yeast Kinome Reveals a Network of Regulated Protein Localization during Filamentous Growth. Mol Biol Cell 19(7):2708-17	SGD
NVJ1/YHR195W	IMP: Inferred from Mutant Phenotype Assigned on 2009-03-10	manually curated	Kvam E and Goldfarb DS  (2006) Structure and function of nucleus-vacuole junctions: outer-nuclear-membrane targeting of Nvj1p and a role in tryptophan uptake. J Cell Sci 119(Pt 17):3622-33	SGD
PPZ1/YML016C	IMP: Inferred from Mutant Phenotype Assigned on 2011-01-26	manually curated	Hirasaki M, et al.  (2011) Saccharomyces cerevisiae protein phosphatase Ppz1 and protein kinases Sat4 and Hal5 are involved in the control of subcellular localization of Gln3 by likely regulating its phosphorylation state. J Biosci Bioeng 111(3):249-54	SGD
RTS1/YOR014W	IMP: Inferred from Mutant Phenotype Assigned on 2009-09-23	manually curated	Chan LY and Amon A  (2009) The protein phosphatase 2A functions in the spindle position checkpoint by regulating the checkpoint kinase Kin4. Genes Dev 23(14):1639-49	SGD
SAT4/YCR008W	IGI: Inferred from Genetic Interaction with SGD:PPZ1 Assigned on 2011-01-26	manually curated	Hirasaki M, et al.  (2011) Saccharomyces cerevisiae protein phosphatase Ppz1 and protein kinases Sat4 and Hal5 are involved in the control of subcellular localization of Gln3 by likely regulating its phosphorylation state. J Biosci Bioeng 111(3):249-54	SGD
SGF29/YCL010C	IMP: Inferred from Mutant Phenotype Assigned on 2012-03-27	manually curated	Shukla A, et al.  (2012) Sgf29p facilitates the recruitment of TATA box binding protein but does not alter SAGA's global structural integrity in vivo. Biochemistry 51(2):706-14	SGD

SGD Home About Blog Site Map Help Terms of Use
© Stanford University, Stanford, CA 94305.