Ontology: Cellular Component (GO:0031011)

Definition: A multisubunit protein complex that contains the Ino80p ATPase; exhibits chromatin remodeling activity and 3' to 5' DNA helicase activity.

Synonyms: INO80 chromatin remodeling complex

View Ontology: (graph) | (text)

This table lists the methods used to annotate genes either directly to the term Ino80 complex (12 genes) or to its variants containing one or more qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.

Annotation Method	GO Term	# Yeast Genes Annotated
Manually curated (download data)	Ino80 complex	12
High-throughput	none	none
Computational (download data)	Ino80 complex	2

Links to Additional Annotations:

• View annotations in multiple organisms using
• Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.

Annotation details for genes that have been directly annotated to the term Ino80 complex or its variants containing one or more qualifiers (NOT, contributes to, or colocalizes with).

Ino80 complex      12 genes directly annotated to this term
Locus	Evidence	Annotation Method	Reference	Assigned By
ACT1/YFL039C	IPI: Inferred from Physical Interaction with SGD:INO80 Assigned on 2005-04-11	manually curated	Shen X, et al.  (2000) A chromatin remodelling complex involved in transcription and DNA processing. Nature 406(6795):541-4	SGD
ARP4/YJL081C	IPI: Inferred from Physical Interaction with SGD:INO80 Assigned on 2005-04-11	manually curated	Shen X, et al.  (2000) A chromatin remodelling complex involved in transcription and DNA processing. Nature 406(6795):541-4	SGD
ARP5/YNL059C	IDA: Inferred from Direct Assay, IMP: Inferred from Mutant Phenotype Assigned on 2005-03-17	manually curated	Shen X, et al.  (2003) Involvement of actin-related proteins in ATP-dependent chromatin remodeling. Mol Cell 12(1):147-55	SGD
	IDA: Inferred from Direct Assay Assigned on 2005-03-17	manually curated	Jonsson ZO, et al.  (2004) Rvb1p/Rvb2p recruit Arp5p and assemble a functional Ino80 chromatin remodeling complex. Mol Cell 16(3):465-77	SGD
ARP8/YOR141C	IPI: Inferred from Physical Interaction with SGD:INO80 Assigned on 2005-04-11	manually curated	Shen X, et al.  (2000) A chromatin remodelling complex involved in transcription and DNA processing. Nature 406(6795):541-4	SGD
IES1/YFL013C	IDA: Inferred from Direct Assay Assigned on 2010-03-02	manually curated	Shen X, et al.  (2003) Involvement of actin-related proteins in ATP-dependent chromatin remodeling. Mol Cell 12(1):147-55	SGD
IES3/YLR052W	IDA: Inferred from Direct Assay Assigned on 2010-03-02	manually curated	Shen X, et al.  (2003) Involvement of actin-related proteins in ATP-dependent chromatin remodeling. Mol Cell 12(1):147-55	SGD
IES4/YOR189W	IDA: Inferred from Direct Assay Assigned on 2007-10-04	manually curated	Morrison AJ, et al.  (2007) Mec1/Tel1 phosphorylation of the INO80 chromatin remodeling complex influences DNA damage checkpoint responses. Cell 130(3):499-511	SGD
INO80/YGL150C	IDA: Inferred from Direct Assay Assigned on 2004-10-04	manually curated	Ebbert R, et al.  (1999) The product of the SNF2/SWI2 paralogue INO80 of Saccharomyces cerevisiae required for efficient expression of various yeast structural genes is part of a high-molecular-weight protein complex. Mol Microbiol 32(4):741-51	SGD
NHP10/YDL002C	IDA: Inferred from Direct Assay Assigned on 2010-03-02	manually curated	Shen X, et al.  (2003) Involvement of actin-related proteins in ATP-dependent chromatin remodeling. Mol Cell 12(1):147-55	SGD
RVB1/YDR190C	IPI: Inferred from Physical Interaction with SGD:INO80 Assigned on 2005-04-11	manually curated	Shen X, et al.  (2000) A chromatin remodelling complex involved in transcription and DNA processing. Nature 406(6795):541-4	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR027238 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
RVB2/YPL235W	IPI: Inferred from Physical Interaction with SGD:INO80 Assigned on 2005-04-11	manually curated	Shen X, et al.  (2000) A chromatin remodelling complex involved in transcription and DNA processing. Nature 406(6795):541-4	SGD
	IEA: Inferred from Electronic Annotation with EBI:IPR027238 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
TAF14/YPL129W	IDA: Inferred from Direct Assay Assigned on 2010-03-02	manually curated	Shen X, et al.  (2003) Involvement of actin-related proteins in ATP-dependent chromatin remodeling. Mol Cell 12(1):147-55	SGD

SGD Home About Blog Site Map Help Terms of Use
© Stanford University, Stanford, CA 94305.