GO term: ribonucleoprotein complex 
Ontology: Cellular Component (GO:0030529)
Definition: A macromolecular complex containing both protein and RNA molecules.
Synonyms: protein-RNA complex; ribonucleoprotein; RNA-protein complex; RNP
View Ontology:
(graph) | 
(text)
Definition: A macromolecular complex containing both protein and RNA molecules.
Synonyms: protein-RNA complex; ribonucleoprotein; RNA-protein complex; RNP
View Ontology:
(graph) | (text)
This table lists the methods used to annotate genes either directly to the term
ribonucleoprotein complex (307 genes)
or to its variants containing one or more
qualifiers (2 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.
Links to Additional Annotations:
| Annotation Method | GO Term | # Yeast Genes Annotated |
|---|---|---|
| Manually curated (download data) | colocalizes_with: ribonucleoprotein complex | 2 |
| ribonucleoprotein complex | 2 | |
| High-throughput | none | none |
| Computational (download data) | ribonucleoprotein complex | 305 |
Links to Additional Annotations:
- View
annotations in multiple organisms using
- Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.
Annotation details for genes that have been directly annotated to the term
ribonucleoprotein complex or its variants containing one or more
qualifiers (NOT, contributes to, or colocalizes with).
| ribonucleoprotein complex 307 genes directly annotated to this term |
||||
|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| BFR1/YOR198C | IDA: Inferred from Direct Assay Assigned on 2005-03-09 |
manually curated | Lang BD, et al. (2001) The brefeldin A resistance protein Bfr1p is a component of polyribosome-associated mRNP complexes in yeast. Nucleic Acids Res 29(12):2567-74 |
SGD |
| BUD21/YOR078W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CBF5/YLR175W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DIP2/YLR129W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| ECM16/YMR128W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| EMG1/YLR186W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| GAR1/YHR089C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| IMG1/YCR046C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| IMG2/YCR071C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| IMP3/YHR148W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| IMP4/YNL075W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| KRR1/YCL059C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LCP5/YER127W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LHP1/YDL051W | IEA: Inferred from Electronic Annotation with EBI:IPR002344 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| LSM1/YJL124C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LSM2/YBL026W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LSM3/YLR438C-A | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LSM4/YER112W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LSM5/YER146W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LSM6/YDR378C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LSM7/YNL147W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LSM8/YJR022W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| LUC7/YDL087C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| MNE1/YOR350C | IDA: Inferred from Direct Assay Assigned on 2011-02-09 |
manually curated | Watts T, et al. (2011) Mne1 Is a Novel Component of the Mitochondrial Splicing Apparatus Responsible for Processing of a COX1 Group I Intron in Yeast. J Biol Chem 286(12):10137-46 |
SGD |
| MNP1/YGL068W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| MPP10/YJR002W | IEA: Inferred from Electronic Annotation with EBI:IPR012173 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| MRD1/YPR112C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| MRP1/YDR347W | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| MRP10/YDL045W-A | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| MRP13/YGR084C | IEA: Inferred from Electronic Annotation with EBI:KW-0687 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| colocalizes_with: ribonucleoprotein complex 2 genes directly annotated to this term |
||||
|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| MLP1/YKR095W | IPI: Inferred from Physical Interaction with SGD:YRA1, SGD:NAB2 Assigned on 2005-11-02 |
manually curated | Vinciguerra P, et al. (2005) Perinuclear Mlp proteins downregulate gene expression in response to a defect in mRNA export. EMBO J 24(4):813-23 |
SGD |
| MLP2/YIL149C | IPI: Inferred from Physical Interaction with SGD:YRA1, SGD:NAB2 Assigned on 2005-11-02 |
manually curated | Vinciguerra P, et al. (2005) Perinuclear Mlp proteins downregulate gene expression in response to a defect in mRNA export. EMBO J 24(4):813-23 |
SGD |
