Ontology: Molecular Function (GO:0017069)

Definition: Interacting selectively and non-covalently with a small nuclear RNA (snRNA).

Synonyms: small nuclear RNA binding

View Ontology: (graph) | (text)

This table lists the methods used to annotate genes either directly to the term snRNA binding (5 genes) or to its variants containing one or more qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.

Annotation Method	GO Term	# Yeast Genes Annotated
Manually curated (download data)	snRNA binding	3
High-throughput	none	none
Computational (download data)	snRNA binding	2

Links to Additional Annotations:

• View annotations in multiple organisms using
• Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.

Annotation details for genes that have been directly annotated to the term snRNA binding or its variants containing one or more qualifiers (NOT, contributes to, or colocalizes with).

snRNA binding      5 genes directly annotated to this term
Locus	Evidence	Annotation Method	Reference	Assigned By
MSL1/YIR009W	IEA: Inferred from Electronic Annotation with EBI:IPR024888 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
MUD1/YBR119W	IEA: Inferred from Electronic Annotation with EBI:IPR024888 Last Updated 2013-03-02	computational	DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms.	InterPro
PRP24/YMR268C	IPI: Inferred from Physical Interaction with SGD:SNR6 Assigned on 2008-08-05	manually curated	Karaduman R, et al.  (2006) RNA structure and RNA-protein interactions in purified yeast U6 snRNPs. J Mol Biol 356(5):1248-62	SGD
SNR14/snR14	IPI: Inferred from Physical Interaction with SGD:SNR6 Assigned on 2009-11-03	manually curated	Siliciano PG, et al.  (1987) An essential snRNA from S. cerevisiae has properties predicted for U4, including interaction with a U6-like snRNA. Cell 50(4):585-92	SGD
SNR6/snR6	IPI: Inferred from Physical Interaction with SGD:SNR14 Assigned on 2009-11-03	manually curated	Siliciano PG, et al.  (1987) An essential snRNA from S. cerevisiae has properties predicted for U4, including interaction with a U6-like snRNA. Cell 50(4):585-92	SGD

SGD Home About Blog Site Map Help Terms of Use
© Stanford University, Stanford, CA 94305.