GO term: vesicle-mediated transport 
Ontology: Biological Process (GO:0016192)
Definition: A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
Synonyms: nonselective vesicle transport; vesicle trafficking; vesicle transport; protein sorting along secretory pathway; vesicular transport
View Ontology:
(graph) | 
(text)
Definition: A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
Synonyms: nonselective vesicle transport; vesicle trafficking; vesicle transport; protein sorting along secretory pathway; vesicular transport
View Ontology:
(graph) | (text)
This table lists the methods used to annotate genes either directly to the term
vesicle-mediated transport (140 genes)
or to its variants containing one or more
qualifiers (0 genes). Note that some genes may have been annotated by more than one method so the numbers in the table below may not add up to the totals given here.
Links to Additional Annotations:
| Annotation Method | GO Term | # Yeast Genes Annotated |
|---|---|---|
| Manually curated (download data) | vesicle-mediated transport | 47 |
| High-throughput | none | none |
| Computational (download data) | vesicle-mediated transport | 109 |
Links to Additional Annotations:
- View
annotations in multiple organisms using
- Search for S. cerevisiae genes annotated, by the Manually curated or High-throughput methods, to this term or to any terms that are descended from this term, i.e., child terms representing more specific biology than this term.
Annotation details for genes that have been directly annotated to the term
vesicle-mediated transport or its variants containing one or more
qualifiers (NOT, contributes to, or colocalizes with).
| vesicle-mediated transport 140 genes directly annotated to this term |
||||
|---|---|---|---|---|
| Locus | Evidence | Annotation Method | Reference | Assigned By |
| APL1/YJR005W | IC: Inferred By Curator from endocytic vesicle Assigned on 2012-10-21 |
manually curated | Carroll SY, et al. (2012) Analysis of yeast endocytic site formation and maturation through a regulatory transition point. Mol Biol Cell 23(4):657-68 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR026739, EBI:IPR002553 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| APL2/YKL135C | IPI: Inferred from Physical Interaction, ISS: Inferred from Sequence or structural Similarity Assigned on 2002-07-08 |
manually curated | Yeung BG, et al. (1999) Adaptor complex-independent clathrin function in yeast. Mol Biol Cell 10(11):3643-59 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR026739, EBI:IPR002553 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| APL3/YBL037W | IEA: Inferred from Electronic Annotation with EBI:IPR008152, EBI:IPR009028, EBI:IPR013038, EBI:IPR015873, EBI:IPR002553 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| APL4/YPR029C | IPI: Inferred from Physical Interaction, ISS: Inferred from Sequence or structural Similarity Assigned on 2002-07-08 |
manually curated | Yeung BG, et al. (1999) Adaptor complex-independent clathrin function in yeast. Mol Biol Cell 10(11):3643-59 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR008152, EBI:IPR002553 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| APL5/YPL195W | IEA: Inferred from Electronic Annotation with EBI:IPR002553 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| APL6/YGR261C | IEA: Inferred from Electronic Annotation with EBI:IPR026739, EBI:IPR026740, EBI:IPR002553 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| APM1/YPL259C | IPI: Inferred from Physical Interaction, ISS: Inferred from Sequence or structural Similarity Assigned on 2002-07-08 |
manually curated | Yeung BG, et al. (1999) Adaptor complex-independent clathrin function in yeast. Mol Biol Cell 10(11):3643-59 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR001392, EBI:IPR008968, EBI:IPR018240 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| APM2/YHL019C | ISS: Inferred from Sequence or structural Similarity Assigned on 2002-07-08 |
manually curated | Yeung BG, et al. (1999) Adaptor complex-independent clathrin function in yeast. Mol Biol Cell 10(11):3643-59 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR018240, EBI:IPR008968 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| APM3/YBR288C | IEA: Inferred from Electronic Annotation with EBI:IPR018240, EBI:IPR008968 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| APM4/YOL062C | IEA: Inferred from Electronic Annotation with EBI:IPR001392, EBI:IPR008968 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| APS1/YLR170C | IPI: Inferred from Physical Interaction, ISS: Inferred from Sequence or structural Similarity Assigned on 2002-07-08 |
manually curated | Yeung BG, et al. (1999) Adaptor complex-independent clathrin function in yeast. Mol Biol Cell 10(11):3643-59 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR000804 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| APS2/YJR058C | IEA: Inferred from Electronic Annotation with EBI:IPR000804 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| APS3/YJL024C | IEA: Inferred from Electronic Annotation with EBI:IPR000804 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| ARF1/YDL192W | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| ARF2/YDL137W | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| ARF3/YOR094W | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| ARL1/YBR164C | IGI: Inferred from Genetic Interaction, IMP: Inferred from Mutant Phenotype Assigned on 2002-05-29 |
manually curated | Abudugupur A, et al. (2002) An ARL1 mutation affected autophagic cell death in yeast, causing a defect in central vacuole formation. Cell Death Differ 9(2):158-68 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| BET1/YIL004C | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| BET3/YKR068C | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| BET5/YML077W | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| BFR2/YDR299W | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| BOS1/YLR078C | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| BUG1/YDL099W | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| CDC28/YBR160W | IMP: Inferred from Mutant Phenotype Assigned on 2012-07-24 |
manually curated | McCusker D, et al. (2012) Cdk1-dependent control of membrane-trafficking dynamics. Mol Biol Cell 23(17):3336-47 |
SGD |
| CHC1/YGL206C | TAS: Traceable Author Statement Assigned on 2002-07-15 |
manually curated | Pishvaee B, et al. (1997) A novel structural model for regulation of clathrin function. EMBO J 16(9):2227-39 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR000547, EBI:IPR001473, EBI:IPR015348, EBI:IPR016025 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| CLC1/YGR167W | TAS: Traceable Author Statement Assigned on 2002-07-15 |
manually curated | Pishvaee B, et al. (1997) A novel structural model for regulation of clathrin function. EMBO J 16(9):2227-39 |
SGD |
| IEA: Inferred from Electronic Annotation with EBI:IPR000996 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro | |
| COP1/YDL145C | IEA: Inferred from Electronic Annotation with EBI:IPR006692, EBI:IPR010714 Last Updated 2013-03-02 |
computational | DDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms. |
InterPro |
| IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB | |
| DDI1/YER143W | IGI: Inferred from Genetic Interaction, IMP: Inferred from Mutant Phenotype Assigned on 2002-10-07 |
manually curated | Lustgarten V and Gerst JE (1999) Yeast VSM1 encodes a v-SNARE binding protein that may act as a negative regulator of constitutive exocytosis. Mol Cell Biol 19(6):4480-94 |
SGD |
| DGK1/YOR311C | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
| DSL1/YNL258C | IEA: Inferred from Electronic Annotation with EBI:KW-0931 Last Updated 2013-03-02 |
computational | UniProt-GOA (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. |
UniProtKB |
